CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 435 K V +GD VGK+ +L +T N F + T+ F+ + V G TV +WDTAGQE Y + YRGA +L + + + +++NV ++W+ EL+ +A + I++ G K DL+ Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHADSNIVIMMAGNKSDLK 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAP1B_DANRE (Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 46/159 (28.93%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 R K V +G G VGK+ L + + F Y PT+ D++ V V+G L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + G+ L + + A++E S+K Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNSCAFLESSAK 149
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 444 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + ++ S+ +K W+ EL+ A P + I L G K DL + + Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN--VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLD 429 K + +GD VGKT L+ Y + F N VVV+G+ V L +WDTAGQE + + YR A +L + + +K +Y+N+ + W+ E++ YA V I+L+G K D Sbjct: 192 KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNI-RAWLGEIREYAQEDVVIVLIGNKAD 307
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLD 429 +K + +G+ VGK+ LL+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA IL + + + ++ + W+ EL+ Y I+ LVG K+D Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLD-NWLNELETYCTRNDIVNMLVGNKID 125 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |