CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.301e-41 Identity = 86/156 (55.13%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI + FP YVPTVFDN+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV +KWI E+ H+ GVPIILVG K DLR+D Q + G P+S A +E+ IGA YIECS+K Sbjct: 14 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQGVPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAK 169
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_DROME (Ras-like GTP-binding protein Rho1 OS=Drosophila melanogaster GN=Rho1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.301e-41 Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D D P+ G + + I A AY+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.230e-41 Identity = 80/156 (51.28%), Postives = 112/156 (71.79%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y AD+F+L FS++ +S++NVS+KW+PE++ + P PIILVGT+ DLR+D + I D P+ + I A +YIECS+ Sbjct: 47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSA 202
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACD_DICDI (Rho-related protein racD OS=Dictyostelium discoideum GN=racD PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 8.230e-41 Identity = 83/156 (53.21%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +K V VGDGAVGKT LLI YT+ FP DYVPTVFDNF+ + + VNL LWDTAGQEDY+ LRPLSY DVFI+ +S++ + S +N+ KW+PE+ G PIILVGTK DLR+DK+ + P+S G L K IGA + ECS+ Sbjct: 9 VKVVVVGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSA 164
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.075e-40 Identity = 79/158 (50.00%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAHGEELRKLIGAPAYIECSS 546 R +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y D+F+L FS++S S++NV +KW+PE++ + P PIILVGT+ DLR+D + I D P+ + + + A +YIECS+ Sbjct: 51 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSA 208
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.075e-40 Identity = 83/156 (53.21%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ FP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPIILVG K+DLR+D Q + G P+++ G+ + IGA Y ECS+K Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK 167
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.075e-40 Identity = 85/156 (54.49%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI + FP YVPTVFDN+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV +KWI E+ ++ GVPIILVG K DLR+D Q + G P+S A +E+ IGA YIECS+K Sbjct: 13 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAK 168
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_PONAB (Rho-related GTP-binding protein RhoC OS=Pongo abelii GN=RHOC PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + G ++ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_MOUSE (Rho-related GTP-binding protein RhoC OS=Mus musculus GN=Rhoc PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + G ++ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_HUMAN (Rho-related GTP-binding protein RhoC OS=Homo sapiens GN=RHOC PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + G ++ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAK 162 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |