CX286801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286801 vs. ExPASy Swiss-Prot
Match: YC48L_THEEB (Ycf48-like protein OS=Thermosynechococcus elongatus (strain BP-1) GN=tll1695 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.657e-14 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 2 WLLVRGGGLFLSKGTGITEEFEEV--PVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYL 301 W++V GG + S +E + E+ P++ G LD+ YR+ +E W AGG+G LL + +GG+TW ++ + +N Y + F + +GF+LG G+LL+Y+ Sbjct: 239 WMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 339
BLAST of CX286801 vs. ExPASy Swiss-Prot
Match: YC48L_SYNJA (Ycf48-like protein OS=Synechococcus sp. (strain JA-3-3Ab) GN=CYA_0848 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 6.296e-14 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 74 PVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 304 P ++ FG L+ Y++ + W GG G L+ + +GGKTW K NI AN YS++F +GF+LG G LL+Y+G Sbjct: 252 PGRALSFGYLNAAYQNDHDLWVVGGGGTLIHSPDGGKTWEEAKKLSNIPANFYSIEFFGPDRGFILGQRGTLLRYVG 328
BLAST of CX286801 vs. ExPASy Swiss-Prot
Match: YC48L_SYNJB (Ycf48-like protein OS=Synechococcus sp. GN=CYB_2153 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.092e-13 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 74 PVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYL 301 P ++ FG L+ Y++ + W GG L+ + +GGKTW + K NI AN YS++F ++GF+LG G LL+Y+ Sbjct: 253 PGRALSFGYLNAAYQNDHDLWVVGGGATLIHSPDGGKTWEQAKKLSNIPANFYSIEFFGPEQGFILGQRGTLLRYV 328
BLAST of CX286801 vs. ExPASy Swiss-Prot
Match: YC48L_SYNR3 (Ycf48-like protein OS=Synechococcus sp. (strain RCC307) GN=SynRCC307_0211 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 2 WLLVRGGGLFLSKGTGITEEFEE--VPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 304 W++ RG L + G EE+ + +P+ + G+G LD+ + Q WA GG+G LL +++GGK W ++ +N F+ K F LG G +L+++G Sbjct: 230 WMVTRGAQLRFNPEGGDYEEWSKPVIPI-TNGYGYLDMAWDPQGNIWAGGGNGTLLVSSDGGKEWEKDPVGTATPSNFTRFVFLGGNKAFALGERGAILRWVG 331
BLAST of CX286801 vs. ExPASy Swiss-Prot
Match: YC48L_PROMP (Ycf48-like protein OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=PMM0296 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 2 WLLVRGGGLFLSKGTGITEEFEE--VPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINE-----KKGFVLGNDGVLLQYLG 304 W+L RG + + + E + + VP+ + G+ LD+G+ + WA GG+G L+ + + GKTW + A N+ N ++F+ + KKGF+LG G +L++ G Sbjct: 231 WMLSRGAEIRFNDDSNDLESWTKPIVPILN-GYNYLDMGWDPEGNIWAGGGNGTLIVSKDDGKTWDSDPVASNLPTNFIKIQFLEKDELDAKKGFILGERGYILRWNG 337 The following BLAST results are available for this feature:
BLAST of CX286801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286801 ID=CX286801; Name=CX286801; organism=Citrus clementina; type=EST; length=542bpback to top |