CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BURXL (Chaperone protein dnaJ OS=Burkholderia xenovorans (strain LB400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.093e-11
Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLGVA +A+ DEIK+AYRKLA+K+HPD N    +AE  F  +K AY  L +S+ R  YD            G   N       GFG F
Sbjct:    7 YEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGH-------AGVDPNMGGAGAQGFGGF 89          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BURPP (Chaperone protein dnaJ OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.093e-11
Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLGVA +A+ DEIK+AYRKLA+K+HPD N    +AE  F  +K AY  L +S+ R  YD            G   N       GFG F
Sbjct:    7 YEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGH-------AGVDPNMGGAGAQGFGGF 89          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCBP (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.093e-11
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTG 438
            ++  Y+ LGV  S+   EIKRAY+KLA+KYHPD N    N+EEKF  IK AY  L++ + R  YD  G+   +   STG
Sbjct:    3 KQDYYKTLGVTQSSDEREIKRAYKKLAMKYHPDRNPGNKNSEEKFKTIKEAYEILIDPKKRTAYDQYGHSAFEQGNSTG 81          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLGVA +A+ +EIK+AYRKLA+K+HPD N  +  AE+KF   K AY  L +S+ R  YD       F ++    Q+      +G G F
Sbjct:    7 YEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYD------QFGHAGVDPQSGMGGGGFGGGGF 90          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKE--PNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIEDFFKDLQEEFQN 549
            YE+LGV+ +A+ +EI++AY++L  K+HPD N +    AEEKF  I+ AY  L + E R  YD      D   + G         F GFG F        ED FKD  +   N
Sbjct:    7 YEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRKEAEEKFKEIQEAYEVLSDPEKRAMYDRFGYVGDVPPNAGSGGGFGG--FGGFGGF--------EDIFKDFGDFINN 108          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD-------SGNRTSDFSYSTGPSQNAQDEEFYG 474
            YEVLGV  +A+  EIK+AYRKLA+KYHPD N  +  AE+KF  I  AY+ L +++ R  YD       +G      SYS+G       E+ +G
Sbjct:    7 YEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGGSYSSGGFGGTPFEDLFG 99          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKE-PNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIEDFFKDL 531
            YE+L V  +A+ +EIK+AYRKLALKYHPD N + P AEEKF  I  AY  L + E R  YD         Y     +N       GF  F +     I DFF+ +
Sbjct:    7 YELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKRALYD--------QYGKAGLEN------QGFSGFNQKSFDDIMDFFESV 97          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPU (Chaperone protein dnaJ OS=Mycoplasma pulmonis GN=dnaJ PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 1
Query:  202 SRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            +++E  Y++LG+  SA   EIK+AYRKLA+++HPD +    +E K   I  AY  L N E +  YD     +    +  P  N  +    GFGNF
Sbjct:    2 NKKEDYYKILGIDKSANEKEIKKAYRKLAMEHHPDRSSSKESEAKMREINEAYEVLSNPEKKAIYDKYGHEA----ANNPGFNGFNAGSAGFGNF 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPN (Chaperone protein dnaJ OS=Mycoplasma pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  199 ASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK------EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            A+ +   YEVLGV+ SATA +IKRA+RKLA++YHPD +K      +   EEKF  +  AY  L ++E R  YD
Sbjct:    2 AAGKRDYYEVLGVSRSATAQDIKRAFRKLAMQYHPDRHKGEGETVQKQNEEKFKEVNEAYEVLSDTEKRGMYD 74          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_DIAST (Chaperone protein dnaJ OS=Diaphorobacter sp. (strain TPSY) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.345e-11
Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK---EPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLGV  +A+ DE+K+AYRKLA+KYHPD N+      AEEKF   K AY  L +++ R  YD            G    A+     GFG F
Sbjct:    7 YEVLGVPKNASDDELKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAE-----GFGGF 93          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_BURXL4.093e-1144.44Chaperone protein dnaJ OS=Burkholderia xenovorans ... [more]
DNAJ_BURPP4.093e-1144.44Chaperone protein dnaJ OS=Burkholderia phytofirman... [more]
DNAJ_BUCBP4.093e-1146.84Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_THIDA5.345e-1143.33Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_THEAB5.345e-1137.50Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_PELCD5.345e-1143.01Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_NITSB5.345e-1141.90Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_MYCPU5.345e-1136.84Chaperone protein dnaJ OS=Mycoplasma pulmonis GN=d... [more]
DNAJ_MYCPN5.345e-1147.95Chaperone protein dnaJ OS=Mycoplasma pneumoniae GN... [more]
DNAJ_DIAST5.345e-1143.48Chaperone protein dnaJ OS=Diaphorobacter sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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