CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_PELUB (Chaperone protein dnaJ OS=Pelagibacter ubique GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNA-EEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIEDFFKD 528
            Y+VLGV+ SA+ +E+K AYRKLA+KYHPD N    A E+KF     AY  L + E ++ YD      +F ++       +    +G G    D     EDFF D
Sbjct:    7 YDVLGVSKSASPEELKSAYRKLAVKYHPDKNPGDKASEDKFKEAGEAYGVLSDKEKKQNYD------NFGHAAFEGGGGRQGGGFGGGFGGADFSDIFEDFFGD 104          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITI (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Ikeda) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRT 414
            Y+VLGV+ +A+ +EIKRAYRKL LKYHPD N  + NAE+K   I  AY+ L + + R  YD  G++T
Sbjct:    7 YQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLGHQT 73          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD-----------SGNRTSDFSYSTGPSQNAQDEEFYG 474
            Y+VLGV+ +A+ +EIKRAYRKL LKYHPD N  + NAE+K   I  AY+ L + + R  YD            GN      ++ G   N   E  +G
Sbjct:    7 YQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLGHQAFKNSGGGNYQQHHGFTGGIDPNDIFENIFG 103          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein dnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNA---EEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLGV  +A+ DEIK+AYRKLA+K+HPD N+   A   EEKF   K AY  L +++ R  YD
Sbjct:    7 YEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYD 69          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ESCF3 (Chaperone protein dnaJ OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ERWCT (Chaperone protein dnaJ OS=Erwinia carotovora subsp. atroseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE LGVA SA   EIK+AY++LA+KYHPD N  +  AE KF  IK AY  L++S+ R  YD
Sbjct:    3 KQDYYESLGVAKSADDREIKKAYKRLAMKYHPDRNPGDSEAEAKFKEIKEAYEILIDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOUT (Chaperone protein dnaJ OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSM (Chaperone protein dnaJ OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSE (Chaperone protein dnaJ OS=Escherichia coli (strain SE11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLU (Chaperone protein dnaJ OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_PELUB6.981e-1138.46Chaperone protein dnaJ OS=Pelagibacter ubique GN=d... [more]
DNAJ_ORITI6.981e-1152.24Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_ORITB6.981e-1140.21Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_LEPCP6.981e-1153.97Chaperone protein dnaJ OS=Leptothrix cholodnii (st... [more]
DNAJ_ESCF36.981e-1149.23Chaperone protein dnaJ OS=Escherichia fergusonii (... [more]
DNAJ_ERWCT6.981e-1152.31Chaperone protein dnaJ OS=Erwinia carotovora subsp... [more]
DNAJ_ECOUT6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSM6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSE6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOLU6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O17:K52... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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