CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO27 (Chaperone protein dnaJ OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO24 (Chaperone protein dnaJ OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYRKLA+KYHPD N+    AEEKF  I  AY  L + + +  YD
Sbjct:    7 YEVLGLSKGASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYD 67          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOSB (Chaperone protein dnaJ OS=Azoarcus sp. (strain BH72) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 42/95 (44.21%), Postives = 53/95 (55.79%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKE-PNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDV 498
            YEVLGV   A  DEIK+AYRKLA+KYHPD N +   AEEKF   K AY  L +++ +  YD  G+   D S   G       + F GF +   D+
Sbjct:    7 YEVLGVNRDAGDDEIKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLSDAQKKGAYDRYGHAGVDPSMGGG----GGGQGFEGFADAFGDI 97          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAPZ (Chaperone protein dnaJ OS=Anaplasma phagocytophilum (strain HZ) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD-----------SGNRTSDFSYSTGPSQNAQD--EEFY--GFGNFLR--------------DVQITIEDFFKDLQ 534
            Y++LGV+  A+ +EIK++YRK   +YHPD N     AEEKF +I  AY+ L +S+ R  YD            GN+     +  G S +  D   +F+  GFG   R              D+++T+ED FK ++
Sbjct:    7 YDLLGVSRGASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLTDSDKRAAYDRYGHSAFANGMGGNQGFTGGFDGGFSTDFSDIFNDFFGGGFGKTSRQSSRENMRGSDLRYDIEVTLEDAFKGVK 141          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJM_MYCGE (DnaJ-like protein MG200 OS=Mycoplasma genitalium GN=MG200 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 1
Query:  199 ASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            A ++   YEVLG+ P A   EIK+A+RKLA KYHPD N  P+A + F  I  A + L N + R  YD
Sbjct:    2 AEQKRDYYEVLGITPDADQSEIKKAFRKLAKKYHPDRNNAPDAAKIFAEINEANDVLSNPKKRANYD 68          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ2_STRAL (Chaperone protein dnaJ 2 OS=Streptomyces albus G GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            Y VLGV   A+ DEIK+A+R+LA + HPDVN +P  +E+F  I  AY  L + + ++ YD G      +   G     Q     GFGNF
Sbjct:    6 YAVLGVRRDASQDEIKKAFRRLARELHPDVNPDPKTQERFKEINAAYEVLSDPQKKQVYDLGGDPLSQNGGGGAGGFGQG----GFGNF 90          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: CBPA_SHIDS (Curved DNA-binding protein OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-------SGNRTSDFSYSTGPSQNAQD 459
            Y ++GV P+     IK AYR+LA KYHPDV+KEP+AE  F  +  A+  L + + R +YD              F +S G S NA+D
Sbjct:    7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEAHFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAED 93          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: CBPA_SERP5 (Curved DNA-binding protein OS=Serratia proteamaculans (strain 568) GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 37/85 (43.53%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD---SGNRTSDFSYST--GPSQNAQD 459
            Y +LGV P+     IK AYR+LA KYHPDV+ E NAEE+F  +  AY  L + E R +YD         +F   T  G + NA+D
Sbjct:    7 YAILGVKPADDLKAIKTAYRRLARKYHPDVSTESNAEEQFKLVAEAYEVLKDDERRAEYDQLREHRNDPNFGRQTQHGSAHNAED 91          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: CBPA_PSESM (Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato GN=cbpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            Y++L V P+A    IK AYRKLA KYHPDV+KE  AE+KF     AY  L + E R +YD
Sbjct:    7 YKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEKRAEYD 66          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_ECO276.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O127:H6... [more]
DNAJ_ECO246.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O139:H2... [more]
DNAJ_CLONN6.981e-1154.10Chaperone protein dnaJ OS=Clostridium novyi (strai... [more]
DNAJ_AZOSB6.981e-1144.21Chaperone protein dnaJ OS=Azoarcus sp. (strain BH7... [more]
DNAJ_ANAPZ6.981e-1133.33Chaperone protein dnaJ OS=Anaplasma phagocytophilu... [more]
DNAJM_MYCGE6.981e-1147.76DnaJ-like protein MG200 OS=Mycoplasma genitalium G... [more]
DNAJ2_STRAL6.981e-1140.45Chaperone protein dnaJ 2 OS=Streptomyces albus G G... [more]
CBPA_SHIDS6.981e-1140.23Curved DNA-binding protein OS=Shigella dysenteriae... [more]
CBPA_SERP56.981e-1143.53Curved DNA-binding protein OS=Serratia proteamacul... [more]
CBPA_PSESM6.981e-1153.33Curved DNA-binding protein OS=Pseudomonas syringae... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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