CX286803

Overview
NameCX286803
Unique NameCX286803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_RAT (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus GN=Bcat2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.816e-16
Identity = 52/156 (33.33%), Postives = 82/156 (52.56%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVV----KGNV-ISTPVIKGTILPGITRKSIIDVAQSQG 451
            +K W+P     SLY+RP+L+G+   LG+    +    + + PVG+YF  + + P++L+ +    RA  GG G  K  GNY             G   VL+L       L EV + NIFV      G + ++TP + G ILPG+ R+S++D+A++ G
Sbjct:  156 DKDWVPDGNGTSLYVRPVLIGNEPSLGVGMVTQALLFVILCPVGSYFPGDSMTPVSLLADPSFVRAWIGGVGDCKLGGNYGPTVAVQQEAQKKGCEQVLWL-YGPDHQLTEVGTMNIFVYWTHEDGELELATPPLDGIILPGVVRQSLLDLARTWG 310          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_MOUSE (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Mus musculus GN=Bcat2 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.803e-16
Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVV---KGNVIS--TPVIKGTILPGITRKSIIDVAQSQG 451
            +K W+P     SLY+RP+L+G+   LG+    +    + + PVG+YF  + + P++L+ +    RA  GG G  K  GNY             G   VL+L       L EV + NIFV    +  V+   TP + G ILPG+ R+S++D+A++ G
Sbjct:  156 DKDWVPDGNGTSLYVRPVLIGNEPSLGVGMVTQALLYVILCPVGSYFPGDSMTPVSLLADPSFVRAWIGGVGDCKLGGNYGPTVAVQREAQKRGCEQVLWL-YGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDLARTWG 310          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT1_HUMAN (Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo sapiens GN=BCAT1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 4.803e-16
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQG 451
            ++ W+P S   SLYIRP  +G+   LG+    +    + +SPVG YF  G   P++L    +  RA  GGTG  K  GNY             G   VL+L       + EV + N+F+   N      ++TP + G ILPG+TR+ I+D+A   G
Sbjct:  148 DQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWL-YGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWG 302          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_BOVIN (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Bos taurus GN=BCAT2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   11 WIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFV---VKGNVIS--TPVIKGTILPGITRKSIIDVAQSQG 451
            W+P S   SLY+RP+L+G+   LG+         + +SPVG YF  + + P++L+ +    RA  GG G  K  GNY             G   VL+L       L EV + NIFV    +  V+   TP + G ILPGI R+S++D+A++ G
Sbjct:  159 WVPGSMGTSLYVRPVLIGNEPSLGVGHPTRALLFVILSPVGAYFPGDALKPVSLLADPSFIRAWVGGVGNYKLGGNYGPTVLVQQEAQKKGCEQVLWL-YGPDHELTEVGTMNIFVFWTYEDGVLELVTPPLDGIILPGIVRQSLLDLARTWG 310          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT_MONBE (Branched-chain-amino-acid aminotransferase OS=Monosiga brevicollis GN=37018 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQ 442
            +K WIP     SLY+RP  +G+   LG+  +         SP G Y+  G  P++L+ +    RA PGG G  K   NY             G   VL+L       + EV + N+F+   N      + TP + GTILPG+TR+SI+D+A+
Sbjct:  152 DKDWIPAGRGYSLYLRPTHIGTAEYLGVGKSSSSLLFCINSPSGAYYSTGFKPVSLLADPAYVRAWPGGVGNTKGGCNYAPSIYPQSQAQAQGCQQVLWL-FGEDHEVTEVGTMNLFMYWKNEQGEDELITPPLDGTILPGVTRQSIVDMAR 302          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT1_RAT (Branched-chain-amino-acid aminotransferase, cytosolic OS=Rattus norvegicus GN=Bcat1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15
Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQG 451
            ++ W+P S   SLYIRP  +G    LG+    +    + +SPVG+YF  G  +P++L    +  R+  GGTG  K   NY             G   VL+L     R + EV + N+F+   N      ++TP + G ILPG+TR+SI+++ +  G
Sbjct:  173 DREWVPYSTSASLYIRPTFIGIEPSLGVKKPSKALLFVILSPVGSYFSNGTFSPVSLWANPKFVRSWKGGTGDFKMGCNYGSSLLAQCEAAENGCHQVLWLYGKENR-ITEVGTMNLFLYWINKDGEEELATPPLDGVILPGVTRQSILELGEEWG 327          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT1_SHEEP (Branched-chain-amino-acid aminotransferase, cytosolic OS=Ovis aries GN=BCAT1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VISTPVIKGTILPGITRKSIIDVAQSQG 451
            ++ W+P S   SLYIRP  +G+   LG+    +    + +SPVG YF  G   P++L    +  RA  GGTG  K  GNY                 VL+L    +  + EV + N+F+   N      ++TP + G ILPG+ R+SI+D+A   G
Sbjct:  147 DEEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVILSPVGPYFSSGSFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVENACQQVLWL-YGEENQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVMRQSILDLAHKWG 301          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCA1_YEAST (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=BAT1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.442e-14
Identity = 50/155 (32.26%), Postives = 72/155 (46.45%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVIS------TPVIKGTILPGITRKSIIDVAQSQ 448
            +K  +P     SLYIRP ++G+   LG+    E    +  SPVG Y+K G   + L       RA PGG G  K   NY             GY   L+L    K  + EV + N+F V  N ++      T  + GTIL G+TR S++ +A+ +
Sbjct:  146 DKHLVPQGNGYSLYIRPTMIGTSKGLGVGTPSEALLYVITSPVGPYYKTGFKAVRLEATDYATRAWPGGVGDKKLGANYAPCILPQLQAAKRGYQQNLWLFGPEKN-ITEVGTMNVFFVFLNKVTGKKELVTAPLDGTILEGVTRDSVLTLARDK 299          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCA2_YEAST (Branched-chain-amino-acid aminotransferase, cytosolic OS=Saccharomyces cerevisiae GN=BAT2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.914e-13
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = 2
Query:   20 PSGKG-SLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVV-------KGNVISTPVIKGTILPGITRKSIIDVAQSQ 448
            P GKG SLYIRP L+G+ A LG++        +   PVG Y+K G   + L       RA PGG G  K   NY             GY   L+L   +   + EV + N F V       K  +++ P + GTIL G+TR SI+++A+ +
Sbjct:  134 PEGKGYSLYIRPTLIGTTAGLGVSTPDRALLYVICCPVGPYYKTGFKAVRLEATDYATRAWPGGCGDKKLGANYAPCVLPQLQAASRGYQQNLWLFGPNNN-ITEVGTMNAFFVFKDSKTGKKELVTAP-LDGTILEGVTRDSILNLAKER 282          
The following BLAST results are available for this feature:
BLAST of CX286803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
BCAT2_RAT2.816e-1633.33Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT2_MOUSE4.803e-1633.33Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT1_HUMAN4.803e-1633.97Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT2_BOVIN1.397e-1535.29Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT_MONBE1.825e-1533.55Branched-chain-amino-acid aminotransferase OS=Mono... [more]
BCAT1_RAT1.825e-1532.69Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT1_SHEEP2.384e-1533.33Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCA1_YEAST3.442e-1432.26Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCA2_YEAST2.914e-1334.44Branched-chain-amino-acid aminotransferase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionC01001B12Rv Veg1 Citrus clementina cDNA clone C01001B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286803 ID=CX286803; Name=CX286803; organism=Citrus clementina; type=EST; length=523bp
AAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTTCCTTATATATCAGGC
CATTGCTAATGGGAAGTGGAGCTGTTCTTGGTCTTGCACCTGCTCCTGAA
TATACATTTCTGATTTATGTTTCACCTGTTGGGAACTACTTTAAGGAAGG
CATTGCACCCATAAATTTGGTTGTTGAGCATGAATTACATCGTGCAACTC
CTGGGGGAACTGGAGGCGTAAAGACTATAGGAAACTATGCTGCGGTTCTT
AAGGCTCAATCTGCTGCGAAGGCCAAAGGTTATTCTGATGTTCTTTACCT
TGATTGTGTTCACAAGAGATACCTGGAAGAGGTTTCCTCTTGCAACATTT
TTGTCGTGAAGGGCAATGTTATATCCACTCCTGTGATAAAAGGAACTATC
TTACCTGGCATTACAAGAAAGAGTATAATTGATGTTGCTCAAAGCCAAGG
GTTCCAGGTTGAGGAACGCCTTGTGACAGTGGAGGAGTTACTTGATGCTG
ATGAAGTTTTTTGTACTGGTACA
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