CX286824
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 44/159 (27.67%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 19 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 480 +S + DG I++ + + D + ++ I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F +I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+TI++W Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 330
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 44/159 (27.67%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 19 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 480 +S + DG I++ + + D + ++ I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F +I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+TI++W Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 330
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 44/159 (27.67%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 19 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 480 +S + DG I++ + + D + ++ I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F +I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+TI++W Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 330
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11 Identity = 44/159 (27.67%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 19 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 480 +S + DG I++ + + D + ++ I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F +I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+TI++W Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 330
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 34/120 (28.33%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 124 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD-DRTIRIW 480 E+ + ++ S + KF+L L+ + LW+ K + Y GHK ++ I S F +I +GSED+ +YI++ + +++ L GH V V+ +P + + A + DR+++IW Sbjct: 213 EDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 37/121 (30.58%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 124 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 480 +E+ + S + K++L + L+ + LW+ G+ K + +Y+GH+ +++ I + F +I SGSED ++Y+W+ + +++ +L GH+ AV +P +M+AS + D TIRIW Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLWDF-GKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQ-NMIASGALEPDNTIRIW 364
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: DCAF8_PONAB (DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 124 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW-----------GLKDLNVKRK 510 E IT S D LL + +++I+L+N + V +YKGH+ + V F G + F+ SGS+ +++W ++SC +I + G G VNC+ +P P +LA++ D ++IW GLKD+ K K Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNK 526
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: DCAF8_HUMAN (DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.967e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 124 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW-----------GLKDLNVKRK 510 E IT S D LL + +++I+L+N + V +YKGH+ + V F G + F+ SGS+ +++W ++SC +I + G G VNC+ +P P +LA++ D ++IW GLKD+ K K Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNK 526
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 44/166 (26.51%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 10 TLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNV 501 T + ++ S ++++ +L L D EA + + +I+S ++L ++ I LW++ + V +YKGH ++ +R + ++AS S+DS V +W + +I H+ AVN V ++P N ++LAS S DRT+++W L+ N+ Sbjct: 63 TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK-GCVFRYKGHTQA---VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEKFNM 223
BLAST of CX286824 vs. ExPASy Swiss-Prot
Match: DCAF8_RAT (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 124 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW-----------GLKDLNVKRK 510 E IT S D LL + +++I+L+N + + +YKGH+ + V F G + F+ SGS+ +++W ++SC +I + G G VNC+ +P P +LA++ D ++IW GLKD+ K K Sbjct: 379 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVKIWAPTAEASTELTGLKDVIKKNK 520 The following BLAST results are available for this feature:
BLAST of CX286824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286824 ID=CX286824; Name=CX286824; organism=Citrus clementina; type=EST; length=544bpback to top |