CX286831

Overview
NameCX286831
Unique NameCX286831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length517
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:396..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.637e-19
Identity = 58/176 (32.95%), Postives = 94/176 (53.41%), Query Frame = 1
Query:   10 DIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEE----RKMNGRDGGNKLTDLLGTLISLMDD 516
            D+ F PYG  WR +RKI  + L S K ++ YR +R+EE+ ++   ++ + +  E VNL++ L L     + RV      FG    G + R ++F  +  EL  L G F VGD+ P+   +D L G+  ++K+ H   D F+  ++++    RK NG DG  +  DL+  L+ L  D
Sbjct:  113 DVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRV-----AFGKKYEGEEERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGELDAFVDHVIDDHLLSRKANGSDGVEQ-KDLVDVLLHLQKD 282          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.890e-17
Identity = 56/173 (32.37%), Postives = 87/173 (50.29%), Query Frame = 1
Query:   19 FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDIL----EERKMNGRDG-GNKLTDLLGTLISLMDD 516
            F P+GP W+ ++K+    L SG+ +D +  VRQ+E       +   G   E V+    L     N + R+ L  +     T  +D +A+E K +V  +  L G FNV DF+  L+  DLQG  RK+K+   RFDV +  I+    EER+ N   G   +  D+L  L+ + +D
Sbjct:  117 FAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQK-----TSENDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDLQGFNRKIKETRDRFDVVVDGIIKQRQEERRKNKETGTAKQFKDMLDVLLDMHED 284          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.379e-17
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   25 PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLLGTLISLMDD 516
            PYG  WR ++ +S +HL S K +  ++ VRQEE+ ++   +  + ++PVNL++ L+    + + RV LG R +G GT        +FK ++  LM   G F +G +VP L   D + G+  +++K    FD  L  I+++ +    DG    TD +  L++   D
Sbjct:  116 PYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALG-RKYGVGT--------DFKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARLEKTANDFDKLLERIVQDHE----DGDGDKTDFVDVLLAAQRD 267          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.600e-16
Identity = 51/178 (28.65%), Postives = 86/178 (48.31%), Query Frame = 1
Query:    4 YQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRD-----GGNKLTDLLGTLISLMDD 516
            +QD +F PYGP W+ ++K+    L  G  LD +  VRQ E     + +   G   E V+          N + R++    V    T   +   +E + +V +   L+G FN+ DFV  L+R DLQG  ++++K+   FD  L  I+++R+   R+     G  +  D+L  L  + +D
Sbjct:  112 FQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMI----VSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLEKIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISED 285          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 2.089e-16
Identity = 48/148 (32.43%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    7 QDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEE 441
            +DI+F PYG  W+ ++ +  VHL + K +  + ++R+EE+ V+T  L  AS+ +  VNL++ L     + + R+ LG R + +  GG D      K++V+      G F  GDF+P+L  +D + G+  KMK ++ + D FL  +++E
Sbjct:  114 RDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLG-RKYNEEEGGID-----IKNLVMTSSEFFGKFFFGDFIPSLAWIDWISGIDDKMKDINNKLDCFLDSMVQE 255          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16
Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   13 IVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDIL-------EERKMNGRDG----GNKLTDLLGTLISLMDD 516
            + F PYG  WR ++K+S   L   +++++++H+R +E   L R L++     E VN+ + L     N +  +M+G              A+E + +V ++  + G FNV DF+   +++DLQG  ++++ L +RFD  +  I+       ++R+ NG+ G    G+ + D L  L+   +D
Sbjct:  115 LAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVISIMMVG-------------EAEEARDVVRDVTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSGDGIRDFLDILLDCTED 282          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16
Identity = 50/175 (28.57%), Postives = 94/175 (53.71%), Query Frame = 1
Query:    1 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVAR-KMKKLHKRFDVFLSDILE--ERKMN---GRDGGNKLTDLLGTLISL 507
            ++ D+V  PYG  WR LRKIS + L S K++  +R +R+EE+    +++ S     +NL++ ++L +     R   G +         +   +EF  ++ +L       N+ D  P+L+ L L   ++ K++K+HK+FDV +  IL+  + K+N    ++ G K  DL+  L+++
Sbjct:  107 DFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFGEK---------NKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDVIVETILKGHKEKINKPLSQENGEKKEDLVDVLLNI 272          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-16
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = 1
Query:    7 QDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE----MAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLLGTLIS 504
            +D+ F PYG  WR ++ I   +L + K +  Y  +R+EE    +  L +A  S+   PVNL+Q L     + + RV LG +  G   G       + +++V     L G F VG+++P+L  +D ++G+  KM+ + KRFD FL  +++E +   ++  + L D L T+ S
Sbjct:  113 RDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKKDG------IDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKRFDEFLERVVKEHEEADKETRSDLVDKLLTIQS 277          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.037e-15
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   10 DIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEERKMNGR------DGGNKLTDLLGTLI 501
            DI F PYG  WR +RKI +V L S K +     +R+EE+  L + +AS     VNL+Q ++  +     R   G R             +EF S V E+M LAG FN+ D  P+ + L+ L  +  K + LH++ D  L  I+++ K N R      +GG +  DL+  L+
Sbjct:  102 DIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKRYM---------EQEEFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEGGEE--DLIDVLL 261          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.037e-15
Identity = 48/164 (29.27%), Postives = 84/164 (51.22%), Query Frame = 1
Query:    1 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLD-LQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLL 489
            N +D+   PYG  WR ++ +  +HL S K +  +R VR+EE+ ++   +  + + P N+++ L     + + RV LG R +G  T        +FK +   L  L G F++G FVP L  +D ++G   ++ K+ K  D F   ++++ +   R  G  L D L
Sbjct:  109 NNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALG-RKYGGET--------DFKKLTDRLSELLGTFSIGSFVPWLAWVDWIRGWDAQLDKMGKDLDDFFEKVVQDHEDGDRRDGTDLIDAL 263          
The following BLAST results are available for this feature:
BLAST of CX286831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
C71A1_PERAE2.637e-1932.95Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C93A1_SOYBN1.890e-1732.37Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71AN_ARATH9.379e-1730.91Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN1.600e-1628.65Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71AR_ARATH2.089e-1632.43Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC4.655e-1627.07Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71DC_CATRO4.655e-1628.57Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AK_ARATH4.655e-1630.99Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA1.037e-1533.33Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AP_ARATH1.037e-1529.27Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC01001E08Rv Veg1 Citrus clementina cDNA clone C01001E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286831 ID=CX286831; Name=CX286831; organism=Citrus clementina; type=EST; length=517bp
AACTATCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCT
GAGGAAGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACT
ACAGGCACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCG
AGTGCAGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGT
TGTGAATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACG
GTACCGGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTG
GAGCTGATGGTGCTGGCGGGTGTGTTCAACGTCGGTGATTTTGTCCCCGC
CCTTGAGCGGCTAGACTTACAGGGAGTGGCACGTAAAATGAAGAAGCTGC
ACAAAAGATTTGATGTGTTTTTGAGTGATATCTTGGAGGAGCGCAAGATG
AACGGTCGTGACGGAGGGAATAAGCTTACGGACTTGCTGGGTACCTTGAT
TTCGTTGATGGATGATG
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