CX286869

Overview
NameCX286869
Unique NameCX286869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length536
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.894e-24
Identity = 60/177 (33.90%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   14 VVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEA-KPGDN-FARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            V  L    NI R++LYD +   L +   S ++ M+GL NE LQ ++++  +A  W+Q  +    +  +   I VGNE  K  D+   + L+PAM+++  A+   GL  Q+ V++      L  S+PPS GSFK+++   L PL+ F +   SP L+N YP+FA   + +++ L+Y L
Sbjct:   46 VAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVL 222          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.643e-24
Identity = 60/179 (33.52%), Postives = 104/179 (58.10%), Query Frame = 2
Query:   14 VVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNF--ANNVKFKYIAVGNE---AKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDE-SFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGNRQISLDYA 532
            VV L  +N I++++L++ +   L+AL  + I+VM+G+PN+ L  +A + A A  WV  NV     +N V  +Y+AVGNE         F    +PA++NIQ+AI  AGL  Q+KV+  +        S  PS G F+ + R ++  +++FL+DN +P  +N+YP+ ++  +    +++A
Sbjct:   44 VVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDPNFPVEFA 222          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.676e-24
Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYA 532
            DVV LY    I  MR+Y+P  + L AL G+ I V++ +    L  +AS+ + A  WV+ NV +F   V F+YIAV NE       +  ++PAMRN+Q A+  A  G+ IKVST +     + + PPS G    D    L P++ FL     PLL N+YPYFA  GN R I L +A
Sbjct:   42 DVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDV-GPALPSLASSPSAAAAWVKANVSSFP-GVSFRYIAVRNEVMDSAGQST-ILPAMRNVQRAL--AAAGSPIKVSTSVRFDVFNNTSPPSNGVL-ADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFA 210          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.676e-24
Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 2
Query:    8 RDVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFA--RYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            ++V+ L       +++LYD + +AL A  GS  E+ + L NE L ++ S+  +A  WV+ NV+ +  N K   I VGNE    +  A    L PAM++I  A+   GL  QI V+T      LD S+PPS  SF++D    L P++ F     SP+L+N YP+FA   N + +SLD+ L
Sbjct:   42 KNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQM-SDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVL 219          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.297e-23
Identity = 61/166 (36.75%), Postives = 100/166 (60.24%), Query Frame = 2
Query:   50 MRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNE--AKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYR-PILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            ++LYD + E+L  L  +N+ V + +PN  +  ++SNQ  A+ WV+ N+  +    + +++ VGNE  +    N +  LVPAMR I N++   G+ N IKV T +   +L  SFPPS G+F+++   P++ PL++FLN   S   +N++PYF  + N    SLD+AL
Sbjct:   71 VKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIHN-IKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFAL 235          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.297e-23
Identity = 64/181 (35.36%), Postives = 100/181 (55.25%), Query Frame = 2
Query:   14 VVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVR---NFANNVKFKYIAVGNE---AKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGA-LDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGNRQISLDYAL 535
            VV L   N I +++L+D + + L AL GSNI V +G+ N  L+ + ++   A +WV +NV    N  N V+ +Y+AVG E      G+ +  +++ A  NIQNA+  A L N++KV       + L ES  PS G F+ D    +  L+ FL  + SP  V + P+ +   N+ ISLD++L
Sbjct:   43 VVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQNKNISLDFSL 223          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.137e-22
Identity = 64/176 (36.36%), Postives = 94/176 (53.41%), Query Frame = 2
Query:   14 VVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG-DNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYF-AIAGNRQISLDYAL 535
            VVAL     IR +RLY+ +   L AL  + I+V++ +PN+ L  I  + + A  WV+ NV           ++VG+E      N A  LV A++N+  A+  A L   IKVST + T  + + FPPS+  F +    ++ PL+ FL    S L+VN+YPY   +  N  I LDYAL
Sbjct:   49 VVALLKAQEIRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSLSNAAPVLVSAIKNVHAALLSANLDKLIKVSTPLSTSLILDPFPPSQAFFNRSLNAVIVPLLSFLQSTNSYLMVNVYPYIDYMQSNGVIPLDYAL 224          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.531e-20
Identity = 58/177 (32.77%), Postives = 90/177 (50.85%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG-DNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFA-IAGNRQISLDYAL 535
            D+V L     I  +RLYD N   L+A   ++IEVM+G+ NE + +I    + A  WV  NV  +  +     IAVG+E      + A  L  A+ NI  A+  + L  ++KVS+ +    + + FPPS  +F   +   +  L++FL +  S  ++N YPY+     N    LDYAL
Sbjct:   42 DIVTLLKSQQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTTIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYAL 218          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.093e-13
Identity = 56/178 (31.46%), Postives = 85/178 (47.75%), Query Frame = 2
Query:   23 LYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQA---EANTWVQNNVRNFANNVKFKYIAVGNE--AKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFP-PSRGSFKQDYRPILDP-LIRFLNDNRSPLLVNLYPYFAIAGNRQISLDYAL 535
            L  +  I R++L+D N   + A  G+ I + + LPN  L  +A        A +W++ N+  +        +  GNE       N    L+PAMR +  A+   GL   ++V+T    G L  S   PS  SF+  Y   L P +++F  D  SP +VN YPYF+    R  +L+YAL
Sbjct:   47 LATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL-TGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSY---RPETLNYAL 220          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 9.950e-12
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  266 ARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGNRQI 517
            A  L+PA+ ++ NA+  + L  QIKVST      + ++FPPS+  F Q +  I+ PL++FL+   SPL++NLYPY+    N+ +
Sbjct:   37 APLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGV 120          
The following BLAST results are available for this feature:
BLAST of CX286869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E1314_ARATH3.894e-2433.90Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E135_ARATH6.643e-2433.52Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13C_HORVU8.676e-2440.57Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E1310_ARATH8.676e-2436.87Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
EA6_ARATH3.297e-2336.75Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E139_ARATH3.297e-2335.36Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E132_ARATH2.137e-2236.36Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E134_ARATH1.531e-2032.77Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E13B_WHEAT3.093e-1331.46Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E131_ARATH9.950e-1239.29Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC01002A05Rv Veg1 Citrus clementina cDNA clone C01002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286869 ID=CX286869; Name=CX286869; organism=Citrus clementina; type=EST; length=536bp
ATCAAAACGAGATGTCGTAGCTCTCTACAACCAAAACAACATCAGAAGAA
TGAGACTCTATGATCCAAACATAGAGGCACTCGAAGCTCTCAGAGGCTCC
AACATTGAAGTCATGCTGGGCCTTCCCAACGAGAACCTCCAAAGAATCGC
TTCCAATCAAGCCGAAGCAAACACTTGGGTCCAAAACAACGTCCGAAATT
TTGCTAACAATGTCAAGTTCAAATACATTGCTGTAGGAAATGAAGCAAAA
CCTGGAGATAACTTCGCTCGGTACCTTGTTCCCGCCATGAGAAACATACA
AAACGCCATCAACGGAGCCGGCCTTGGAAACCAAATCAAGGTTTCCACTG
TTATCGAAACTGGAGCTCTTGACGAATCTTTCCCTCCGTCAAGAGGCTCA
TTTAAGCAAGATTACAGACCCATTCTTGATCCCCTCATTCGCTTCCTCAA
CGATAACAGATCCCCCTTGCTTGTCAACTTGTACCCTTACTTCGCAATTG
CTGGTAACCGCCAAATATCTCTGGATTATGCACTAT
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