CX286874

Overview
NameCX286874
Unique NameCX286874
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length403
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 2
Query:    5 GYVEVRPK--AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V  +    +F+W +++    E+PS   P++LWL GGPG S +G G   E+GPF      T L     +W+++A++LF+++PVG G+SY   +S     ND   A D    ++  F +    +    FI  ESY G +
Sbjct:   50 GYVNVNQENTRSLFFWFFEA--LSESPSTR-PLVLWLNGGPGCSSIGYGAASELGPFRVVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHY 187          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: CPVL_MOUSE (Probable serine carboxypeptidase CPVL OS=Mus musculus GN=Cpvl PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.998e-16
Identity = 43/139 (30.94%), Postives = 76/139 (54.68%), Query Frame = 2
Query:    5 GYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GY+ V     +++F+W + +  + E+     P++LWLQGGPG S +  G F E GP+    +  +  R+  W     +L++DNPVGTG+S+ +    +  ++ + A DL + L++ F       K+  ++  ESY GK+
Sbjct:   78 GYITVNQTYNSNLFFWFFPARMQPEDA----PVVLWLQGGPGGSSM-FGLFVEHGPYIITSNMTVVARDFPWTFTLSMLYIDNPVGTGFSFTDHFQGYATSEDDVAQDLYSALIQFFTLFPEYAKNDFYVTGESYAGKY 211          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16
Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 2
Query:   35 MFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST-------WLKKADLLFVDNPVGTGYSYAEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            +F+WL+++   +E+ +K  P++LWL GGPG S V  G  EE+GPF  ++K    T       W + A++LF+D PVG GYSY+  +S    N D   A D    L++   +    +    +IV ESY G +
Sbjct:   67 LFYWLFEA---VED-AKSKPLVLWLNGGPGCSSVAYGEAEEIGPF--HIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHY 191          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16
Identity = 49/141 (34.75%), Postives = 69/141 (48.94%), Query Frame = 2
Query:    5 GYVEVRPKAH--MFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNS-SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V P A   +F+WL ++P     PS   P++LWL GGPG S +  G  EEVGPF        L+     W K A++LF+D+P G G+SY   +S      D     D    L+    +    ++   +I  ESY G +
Sbjct:   55 GYVTVDPAAGRALFYWLTEAP----RPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHY 191          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    5 GYVEVRPKAH---MFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV + P+     +F+W +++    +N S+  P++LWL GGPG S +  G  +E+GPF  +     L   + +W K+A++LF++ PVG G+SY  ++    K  D   A+D    L+  F K    + S  +I  ESY G +
Sbjct:   56 GYVNLGPEQKQKALFYWFFEAQ---QNSSRR-PLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHY 193          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 2
Query:    5 GYVEVRPK--AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V       +F+WL +SP    + S   P++LWL GGPG S +G G  EE+GPF      + L     TW  +A++LF+++P G G+SY   +S      D   A +    L++  ++    Q    +IV ESY G +
Sbjct:   47 GYVTVNESHGRSLFYWLTESP----SSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHY 183          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15
Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 2
Query:    5 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF---DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V  K     + Y +       SKP  ++LWL GGPG S +G+G F E GPF      L     +W ++A++L+++ PVG G+SY+  +S +   ND   A D    L   F K        LFI  ESY G +
Sbjct:   48 GYVTVDDKKQRALFYYFAEAETNPSSKP--LVLWLNGGPGCSSLGVGAFSENGPFRPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHY 182          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    5 GYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GY+ V     +++F+W +  P R +    P  ++LWLQGGPG S +  G F E GP+    +  +  R+  W     +L++DNPVGTG+S+ +    +  ++ + A DL + L++ F       K+  +I  ESY GK+
Sbjct:   78 GYITVNQTYNSNLFFWFF--PARTQPADAP--VVLWLQGGPGGSSM-FGLFVEHGPYIITSNMTVLSRDFPWTFSLSMLYIDNPVGTGFSFTDHIQGYAIDEDDVAQDLYSALVQFFKLFPEYAKNDFYITGESYAGKY 211          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    5 GYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----LKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            G++ V     ++ F+W  +S    +N  K  P++++LQGGPG +      F E GP++      L  R  TW  +  +L++DNPVGTG+S+ +    +  N+ E A +L T L + +        + L+I  ESY GK+
Sbjct:  105 GFITVNETYNSNTFFWFLES----QNGDKNSPLVIFLQGGPGGAST-FSLFVETGPYELLDNFTLVQREITWNSEFAMLYIDNPVGTGFSFTDSQEGYSNNEDEIATNLYTFLQQFYKLYPEYYTNELYITGESYAGKY 238          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.888e-15
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    5 GYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GY  V     A++F+  Y+S    +N     P+ILWL GGPG S + +  F E GP+    +  L    ++W   A++L+VD+P+G G+SY  D+  +   + E + +L + L +  +K     K PL+I  ESY G +
Sbjct:   28 GYFNVNETTNANLFYLFYES----QNSPSTDPLILWLTGGPGCSSL-MAAFYENGPYFVNDNLTLSENPNSWNMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISENLYSFLTQFLSKYPKYSKLPLYIFGESYAGHY 161          
The following BLAST results are available for this feature:
BLAST of CX286874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
SCP33_ARATH2.062e-1634.04Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
CPVL_MOUSE5.998e-1630.94Probable serine carboxypeptidase CPVL OS=Mus muscu... [more]
SCP29_ARATH7.834e-1635.88Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP28_ARATH7.834e-1634.75Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP35_ARATH1.336e-1533.10Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP23_ARATH1.336e-1534.04Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP45_ARATH1.745e-1535.77Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
CPVL_RAT1.745e-1532.37Probable serine carboxypeptidase CPVL OS=Rattus no... [more]
CPVL_DICDI1.745e-1531.65Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
SCPL1_DICDI3.888e-1533.09Serine carboxypeptidase S10 family member 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC01002A10Rv Veg1 Citrus clementina cDNA clone C01002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286874 ID=CX286874; Name=CX286874; organism=Citrus clementina; type=EST; length=403bp
GTGGGGGTATGTTGAAGTTAGGCCAAAAGCACACATGTTTTGGTGGCTAT
ATAAAAGTCCATACAGAATTGAAAATCCCTCAAAGCCATGGCCTATCATT
CTTTGGTTGCAAGGTGGCCCTGGTGCTTCAGGAGTTGGGATTGGGAATTT
TGAAGAGGTTGGGCCATTTGACACTTATTTGAAGCCAAGGAATTCAACAT
GGTTGAAGAAAGCTGACCTATTATTTGTTGACAATCCTGTGGGAACAGGA
TACAGCTATGCTGAGGATAATAGCTCGTTTGTGAAAAACGATGTTGAGGC
AGCAAATGATTTAACTACATTGCTAATGGAGTTATTTAACAAGAATGAAA
TTCTGCAAAAGAGTCCTCTGTTTATTGTGGCAGAGTCTTATGGAGGCAAA
TTT
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