CX286874

Overview
NameCX286874
Unique NameCX286874
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length403
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 68.1662 bits (165), Expect = 1.529e-11
Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 2
Query:    5 GYVEVRPK--AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFD------------TYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V      ++F+++ +S     +P K  P++LWL GGPG S    G   E GPF+             +L P    W K + ++++D+P G G SY+++ S +   D++ A D  T L++ F        +P +I  ESY G +
Sbjct:   54 GYVTVDEGHGRNLFYYVVESE---RDPGKD-PVVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSVKSLPKLHLNPY--AWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVY 193          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 38/138 (27.54%), Postives = 67/138 (48.55%), Query Frame = 2
Query:    5 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            G+ +V     + +W  +S    +N     P+I W  GGPG S +  G   E+GP+        L+    +W K A ++++++P G GYSYA D +    +D+ +  +    + + F +    +    FI+ ESYGG +
Sbjct:   36 GFFQVSDNHVLHYWFVES----QNEPSNDPLIFWFNGGPGCSSLD-GLLNEMGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYATDGNITTNDDLTSLENYEA-VKQFFTEFPQFRHHQTFIMGESYGGVY 167          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 44/141 (31.21%), Postives = 68/141 (48.23%), Query Frame = 2
Query:    5 GYVEVRPKA--HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSS-FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V   +   +F+WL ++    + P    P+++WL GGPG S V  G  EE+GPF      + L      W   ++LLF++ P G G+SY   +S  F   D   A D    L++  ++        ++I  ESY G +
Sbjct:   54 GYVTVDKLSGRSLFYWLTEAS---DLPLSK-PLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHY 190          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 43/144 (29.86%), Postives = 70/144 (48.61%), Query Frame = 2
Query:    5 GYVEV--RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 400
            GY+ V    +  MF++  KS    E+  K  P++LWL GGPG S    G   E GP    ++  N +          W K A+++++D PVGTG+SY+ +  + + +D  +A  +   L +   K+     +P +    SY GK
Sbjct:   44 GYIGVGEEDEDQMFYYFIKS----ESNPKTDPLLLWLSGGPGCSSF-TGLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSDTGSAKRVDEFLRKWLTKHPEYFSNPFYAGGNSYSGK 182          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.406e-11
Identity = 44/143 (30.77%), Postives = 68/143 (47.55%), Query Frame = 2
Query:    5 GYVEV--RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 397
            GY+ V    K  MF++  KS     NP K  P++LWL GGP  S      +E  GP     +  N +          W K A +L++D PVGTG+SY+ +  + + +D   A  +   L +  +K+     +PL++   SY G
Sbjct:   47 GYIGVGEAEKDQMFYYFIKSE---SNPEKD-PLLLWLSGGPFCSSFTALIYEN-GPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSDTGVAKPVNEFLHKWLDKHPEFLSNPLYVAGNSYSG 184          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: KEX1_SCHPO (Carboxypeptidase kex1 OS=Schizosaccharomyces pombe GN=kex1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.406e-11
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 2
Query:   35 MFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            +F+W+++S      P      ILWL GGPG S    G+  EVGPF    +   +     W +  +LLFVD P+GTGYSY+     F  N+ + AND +    +   +         FI  ES+ G++
Sbjct:   60 LFFWMFESV----KPEYEHRSILWLNGGPGCSSED-GSLMEVGPFRLDDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSL-AKDFQSNNEKMANDFSIFFEKFLEEFPERANDEWFIAGESFAGQY 180          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP54_ARATH (Putative serine carboxypeptidase-like 54 OS=Arabidopsis thaliana GN=SCPL54 PE=5 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 2
Query:   92 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            P+++WL GGPG S                   R  ++LK ++L++VD P+ TG+SYA D++    ++   +NDL   L   F ++  L K   +I  ESY G +
Sbjct:   63 PVVIWLSGGPGCSSSN---------------QRYISYLKISNLIYVDQPIRTGFSYANDSTDLRHDEDSVSNDLYDFLQAFFKEHPNLAKDDFYITGESYAGHY 151          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 42/139 (30.22%), Postives = 65/139 (46.76%), Query Frame = 2
Query:    5 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYAEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 403
            GYV V   A    + Y       N     P++LWL GGPG S +  G F+E+GPF  +     L     +W   A++LF+++P GTG+SY    +      D++ A D    L++   +    +    +I  ESY G +
Sbjct:   96 GYVTVNESAGRSLYYYF--VEATNTKNSSPLVLWLNGGPGCSSL-YGAFQELGPFRVHSDNKTLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHY 231          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 42/143 (29.37%), Postives = 65/143 (45.45%), Query Frame = 2
Query:    5 GYVEV--RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 397
            GY+ V    +  +F++  KS    E   K  P++LWL GGPG S +  G   E GP    L   N T          W K + ++F+D PVG G+SY+        +D   A  +   L +   K++    +P ++  +SY G
Sbjct:   50 GYIGVGEEEEVQLFYYFIKS----ERNPKEDPLLLWLSGGPGCSSIS-GLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSG 187          
BLAST of CX286874 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.810e-11
Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 2
Query:    5 GYVEV--RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYAEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 397
            GY+ V    +  +F++  KS     NP +  P++LWL GGPG S +  G   E GP +  ++  N T          W K + ++++D PVGTG+SY+        +D   A  +   L +   K++    +P ++  +SY G
Sbjct:   46 GYIGVGEEEEVQLFYYFIKSE---RNPQED-PLLLWLSGGPGCSSIS-GLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCG 183          
The following BLAST results are available for this feature:
BLAST of CX286874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CBP1_HORVU1.529e-1130.61Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
YUW5_CAEEL2.608e-1127.54Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
SCP25_ARATH2.608e-1131.21Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP16_ARATH2.608e-1129.86Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP17_ARATH3.406e-1130.77Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
KEX1_SCHPO3.406e-1133.07Carboxypeptidase kex1 OS=Schizosaccharomyces pombe... [more]
SCP54_ARATH4.448e-1131.73Putative serine carboxypeptidase-like 54 OS=Arabid... [more]
SCP53_ARATH4.448e-1130.22Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
SCP3_ARATH4.448e-1129.37Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP7_ARATH5.810e-1128.67Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01002A10Rv Veg1 Citrus clementina cDNA clone C01002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286874 ID=CX286874; Name=CX286874; organism=Citrus clementina; type=EST; length=403bp
GTGGGGGTATGTTGAAGTTAGGCCAAAAGCACACATGTTTTGGTGGCTAT
ATAAAAGTCCATACAGAATTGAAAATCCCTCAAAGCCATGGCCTATCATT
CTTTGGTTGCAAGGTGGCCCTGGTGCTTCAGGAGTTGGGATTGGGAATTT
TGAAGAGGTTGGGCCATTTGACACTTATTTGAAGCCAAGGAATTCAACAT
GGTTGAAGAAAGCTGACCTATTATTTGTTGACAATCCTGTGGGAACAGGA
TACAGCTATGCTGAGGATAATAGCTCGTTTGTGAAAAACGATGTTGAGGC
AGCAAATGATTTAACTACATTGCTAATGGAGTTATTTAACAAGAATGAAA
TTCTGCAAAAGAGTCCTCTGTTTATTGTGGCAGAGTCTTATGGAGGCAAA
TTT
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