CX286879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.044e-39 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQERY ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R V+ EEAQA+A EN L F+ETSA A+NV + F + Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTV 167
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.044e-39 Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQERY ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL V EEA+A+A+ L+FMETSA ATNV + F E+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEV 170
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 5.192e-39 Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL V E+ ++YA++ L FMETSA ATNV D F E+ Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEV 170
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.157e-38 Identity = 77/156 (49.36%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL V E+ +++A+ L+FMETSA ATNV + F E+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEV 170
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.973e-38 Identity = 74/156 (47.44%), Postives = 108/156 (69.23%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 K+VL+GD GKS ++ RF + +F ++TIG F ++TLA+ +VK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+A + N+V+ L GNK DL D R V E+A+ +AQ+ GLFF+ETSA ATN+ D F + Sbjct: 17 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTV 172
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.973e-38 Identity = 74/156 (47.44%), Postives = 110/156 (70.51%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 K+VL+GD G GKS+L+ RF K +F +STIG F +++L V+D +K +IWDTAGQERY ++ YYRGA A++VYD+T ++FE + W++EL+ +PN+V+ L GNK+DL V E+A+++A++ L+FMETSA ATNV + F E+ Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEV 170
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 5.740e-38 Identity = 75/156 (48.08%), Postives = 108/156 (69.23%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R V+ E+A+A+A+ FFMETSA + NV + F E+ Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEV 171
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 9.792e-38 Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R V E+AQ+YA++ GL F+ETSA A NV F I Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTI 169
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.279e-37 Identity = 73/156 (46.79%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 514 KLVL+GD G GKS+L+ RF + +F +STIG F +++L ++ +K +IWDTAGQERY ++ YYRGA A++VYD+T +FE A +W++EL+ +PN+V+ L GNK+DL V+ E+ +A+A++ L+FMETSA ATNV + F E+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEV 170
BLAST of CX286879 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.181e-37 Identity = 73/155 (47.10%), Postives = 107/155 (69.03%), Query Frame = 2 Query: 47 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYE 511 KLVL+GD G GKS+L+ RF K +F +STIG F +++L +++ +K +IWDTAGQERY ++ YYRGA A++VYD+T ++E +W++EL+ +PN+V+ L GNK+DL V+ +EA+ A+ GL+FMETSA ATNV + F E Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTE 169 The following BLAST results are available for this feature:
BLAST of CX286879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286879 ID=CX286879; Name=CX286879; organism=Citrus clementina; type=EST; length=521bpback to top |