CX286881

Overview
NameCX286881
Unique NameCX286881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1C_ORYSJ (Dehydration-responsive element-binding protein 1C OS=Oryza sativa subsp. japonica GN=DREB1C PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2
Query:  218 TESPQKRSEPKLADTEERKH-YRGVRRR-PWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            T +P KR   +    E R   YRGVRRR P G++  E+R+P +K SR+WLGTF +   AA+A+D AA  +RGR A LNF
Sbjct:   13 TSAPPKRPAGRTKFRETRHPVYRGVRRRGPAGRWVCEVREPNKK-SRIWLGTFATAEAAARAHDVAALALRGRGACLNF 90          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1C_ORYSI (Dehydration-responsive element-binding protein 1C OS=Oryza sativa subsp. indica GN=DREB1C PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2
Query:  218 TESPQKRSEPKLADTEERKH-YRGVRRR-PWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            T +P KR   +    E R   YRGVRRR P G++  E+R+P +K SR+WLGTF +   AA+A+D AA  +RGR A LNF
Sbjct:   13 TSAPPKRPAGRTKFRETRHPVYRGVRRRGPAGRWVCEVREPNKK-SRIWLGTFATAEAAARAHDVAALALRGRGACLNF 90          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  218 TESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            T  P+K +  K         YRGVR+R  GK+ +E+R+P +K +R+WLGTF +   AA+A+D AA  +RGR A LNF
Sbjct:   28 TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF70_ARATH (Ethylene-responsive transcription factor ERF070 OS=Arabidopsis thaliana GN=ERF070 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  248 KLADTEERKHYRGVRRRPWGKYAAEIR--DPARKG--SRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEA 460
            K A TE  K YRGVR+RPWGK+ AEIR    A KG   R+WLGTF++  +AA AYD+A+ ++ G  A  NF L A
Sbjct:   71 KTAKTE--KKYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGLPA 143          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1B_ORYSJ (Dehydration-responsive element-binding protein 1B OS=Oryza sativa subsp. japonica GN=DREB1B PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  215 WTESPQKRSEPKLADTEERKHYRGVRRRPW-----GKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            W+E P++ +            YRGVRRR       G++  E+R P  +GSR+WLGTF +   AA+A+D+AA  +RGR A LNF
Sbjct:   12 WSEPPKRPAGRTKFRETRHPVYRGVRRRGGRPGAAGRWVCEVRVPGARGSRLWLGTFATAEAAARAHDAAALALRGRAACLNF 94          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1B_ORYSI (Dehydration-responsive element-binding protein 1B OS=Oryza sativa subsp. indica GN=DREB1B PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  215 WTESPQKRSEPKLADTEERKHYRGVRRRPW-----GKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            W+E P++ +            YRGVRRR       G++  E+R P  +GSR+WLGTF +   AA+A+D+AA  +RGR A LNF
Sbjct:   12 WSEPPKRPAGRTKFRETRHPVYRGVRRRGGRPGAAGRWVCEVRVPGARGSRLWLGTFATAEAAARAHDAAALALRGRAACLNF 94          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 2
Query:  266 ERKH--YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            E +H  YRGVRRR  GK+  E+R+P +K +R+WLGTF +   AA+A+D AA  +RGR A LNF
Sbjct:   45 ETRHPIYRGVRRRNSGKWVCEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106          
The following BLAST results are available for this feature:
BLAST of CX286881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DRE1C_ORYSJ6.031e-1149.37Dehydration-responsive element-binding protein 1C ... [more]
DRE1C_ORYSI6.031e-1149.37Dehydration-responsive element-binding protein 1C ... [more]
DRE1B_ARATH6.031e-1145.45Dehydration-responsive element-binding protein 1B ... [more]
ERF70_ARATH7.876e-1153.33Ethylene-responsive transcription factor ERF070 OS... [more]
DRE1B_ORYSJ7.876e-1142.17Dehydration-responsive element-binding protein 1B ... [more]
DRE1B_ORYSI7.876e-1142.17Dehydration-responsive element-binding protein 1B ... [more]
DRE1A_ARATH7.876e-1153.97Dehydration-responsive element-binding protein 1A ... [more]

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Properties
Property NameValue
Genbank descriptionC01002B06Rv Veg1 Citrus clementina cDNA clone C01002B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286881 ID=CX286881; Name=CX286881; organism=Citrus clementina; type=EST; length=470bp
CAACATGACAACGTTGGAAGAAGAATCATCCATCCTGGAATTCATTCGCC
AGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTCTCTTTT
CTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACCCGACTC
CCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAACGTGTT
TGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAGCCGAAG
CTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAGAAGGCC
GTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGGGCAGCA
GGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAAGCTTAT
GATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAATTTCCC
TCTGGAGGCTGGAGCTGATA
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