CX286881

Overview
NameCX286881
Unique NameCX286881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9553 contig Ccv1_Contig9553:33..502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.167e-20
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 2
Query:  266 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            E   YRGVRRRPWGKYAAEIRD  + G RVWLGTFD+  +AA+AYD AA+ MRG+ AILNFP E
Sbjct:   11 EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHE 74          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 2
Query:  251 LADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            ++  +  K YRGVRRRPWGK+AAEIRD  R G RVWLGTF+S  +AA AYD AAF MRG  AILNF  E
Sbjct:   73 VSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.607e-19
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 2
Query:  191 ITCLGSSNWTESPQKRSEPKLADTEERKH-YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            I  +GS+   ++ +   + + +   +RK+ YRG+R+RPWGK+AAEIRDP RKGSR WLGTFD+  +AA+AYD+AA R+RG KA +NFP E
Sbjct:   98 IYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDP-RKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  206 SSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            SS     P   SE +    E +  YRG+R+RPWGK+AAEIRDP+ KG RVWLGTF +  +AA+AYD AA ++RGRKA LNFP
Sbjct:   26 SSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPS-KGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.026e-18
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  242 EPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            E K+   EER  YRGVR+RPWGK+AAEIRD  R G RVWLGTFD   +AA AYD AAF  +G  A LNFP+E
Sbjct:   75 EEKVGIDEERS-YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVE 145          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.026e-18
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 2
Query:  275 HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 454
            HYRGVR+RPWG+YAAEIRDP +K SRVWLGTFD+  +AAKAYD+AA   RG KA  NFPL
Sbjct:   26 HYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPL 84          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            YRGVR+RPWG++AAEIRDP +K SRVWLGTFDS VDAA+AYD+AA  +RG KA  NFP++
Sbjct:   27 YRGVRKRPWGRFAAEIRDPLKK-SRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPID 85          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18
Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  206 SSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            S N  E    ++ P+ A  E+++ YRGVR+RPWGK+AAEIRDP R  +RVWLGTFD+   AA+AYD AA R RG KA LNFP
Sbjct:   54 SHNPIEESMSKAFPEEA-REKKRRYRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 2
Query:  257 DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            D  +  HYRGVR+RPWG+YAAEIRDP +K SRVWLGTFD+  +AAKAYD+AA   RG KA  NFP
Sbjct:   20 DGVKEVHYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.986e-18
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 2
Query:  248 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            K A+ + +  YRG+R+RPWGK+AAEIRDP R+G+R+WLGTF +  +AA+AYD+AA R+RG KA +NFP E
Sbjct:  115 KSANRKRKNQYRGIRQRPWGKWAAEIRDP-REGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE 183          
The following BLAST results are available for this feature:
BLAST of CX286881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ERF96_ARATH4.167e-2070.31Ethylene-responsive transcription factor ERF096 OS... [more]
ERF92_ARATH2.068e-1965.22Ethylene-responsive transcription factor 1B OS=Ara... [more]
RAP22_ARATH4.607e-1953.33Ethylene-responsive transcription factor RAP2-2 OS... [more]
ERF71_ARATH7.858e-1957.32Ethylene-responsive transcription factor ERF071 OS... [more]
ERF93_ARATH1.026e-1863.89Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF4_NICSY1.026e-1873.33Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF83_ARATH1.340e-1871.67Ethylene-responsive transcription factor 7 OS=Arab... [more]
EF110_ARATH1.340e-1858.54Ethylene-responsive transcription factor ERF110 OS... [more]
ERF4_TOBAC2.286e-1867.69Ethylene-responsive transcription factor 4 OS=Nico... [more]
RA212_ARATH2.986e-1860.00Ethylene-responsive transcription factor RAP2-12 O... [more]

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Properties
Property NameValue
Genbank descriptionC01002B06Rv Veg1 Citrus clementina cDNA clone C01002B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286881 ID=CX286881; Name=CX286881; organism=Citrus clementina; type=EST; length=470bp
CAACATGACAACGTTGGAAGAAGAATCATCCATCCTGGAATTCATTCGCC
AGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTCTCTTTT
CTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACCCGACTC
CCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAACGTGTT
TGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAGCCGAAG
CTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAGAAGGCC
GTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGGGCAGCA
GGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAAGCTTAT
GATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAATTTCCC
TCTGGAGGCTGGAGCTGATA
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