CX286881

Overview
NameCX286881
Unique NameCX286881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9553 contig Ccv1_Contig9553:33..502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 2
Query:  266 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            E   + GVRRRPWG+YAAEIRDP  K  R WLGTFD+  +AA AYD AA  MRG +A  NF
Sbjct:   32 EPGRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMRGTQARTNF 91          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 2
Query:  224 SPQKRSEP-KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            SP    +P  + +   +K YRGVR+R WGK+ AEIR P  + +R+WLGTFD+  +AA AYD AA+++RG  A LNFP
Sbjct:   74 SPNLAPKPVPMKNMTAQKLYRGVRQRHWGKWVAEIRLPKNR-TRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 2
Query:  263 EERKH--YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 457
            E+RK   YRGVR+R WGK+ +EIR P + G R+WLG++D+   AA+AYD+A F +RG K + NFP +
Sbjct:   20 EDRKFKCYRGVRKRSWGKWVSEIRVP-KTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTD 85          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  260 TEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            T   K +RGVR+RPWGK+AAEIRDP ++  R+WLGT+++  +AA  YD+AA ++RG  A+ NF
Sbjct:  116 TTGEKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 177          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  272 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD AA+++RG  A LNFP
Sbjct:  150 KLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 208          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            YRGVR R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D+AA  ++G  A+LNFP
Sbjct:   43 YRGVRMRTWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFP 99          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.777e-13
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  221 ESPQKRSEPKLA---DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            +S  ++SE K     D+ +   YRGVR R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G  AILNFP
Sbjct:   29 KSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREP-RKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP 107          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  203 GSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            GS   T  P    +  +A T+  K YRGVR+R WGK+ AEIR P  + +R+WLGTF++  +AA AYD AA ++RG  A LNFP
Sbjct:   87 GSHLLTAKPTSMKKIDVA-TKPVKLYRGVRQRQWGKWVAEIRLPKNR-TRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFP 167          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            Y+GVR+R WGK+ AEIR+P R G+R+WLGTFD+  +AA AYDSAA ++ G +A LN P
Sbjct:   42 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP 98          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 6.443e-13
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  218 TESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILN 445
            T S Q++ + K      +  YRGVR+R WGK+ AEIR+P RK +R WLGTF +  DAA+AYD AA  + G +A LN
Sbjct:   35 TSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREP-RKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLN 109          
The following BLAST results are available for this feature:
BLAST of CX286881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ERF86_ARATH2.215e-1362.30Ethylene-responsive transcription factor ERF086 OS... [more]
ERF60_ARATH2.215e-1350.65Ethylene-responsive transcription factor ERF060 OS... [more]
ERF15_ARATH2.215e-1352.24Ethylene-responsive transcription factor ERF015 OS... [more]
CRF2_ARATH2.215e-1353.97Ethylene-responsive transcription factor CRF2 OS=A... [more]
RAP24_ARATH2.892e-1361.67Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF37_ARATH2.892e-1358.62Ethylene-responsive transcription factor ERF037 OS... [more]
DREB3_ARATH3.777e-1350.00Dehydration-responsive element-binding protein 3 O... [more]
ERF57_ARATH4.933e-1349.40Ethylene-responsive transcription factor ERF057 OS... [more]
DRE2D_ARATH4.933e-1360.34Dehydration-responsive element-binding protein 2D ... [more]
ABI4_ARATH6.443e-1350.00Ethylene-responsive transcription factor ABI4 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC01002B06Rv Veg1 Citrus clementina cDNA clone C01002B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286881 ID=CX286881; Name=CX286881; organism=Citrus clementina; type=EST; length=470bp
CAACATGACAACGTTGGAAGAAGAATCATCCATCCTGGAATTCATTCGCC
AGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTCTCTTTT
CTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACCCGACTC
CCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAACGTGTT
TGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAGCCGAAG
CTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAGAAGGCC
GTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGGGCAGCA
GGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAAGCTTAT
GATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAATTTCCC
TCTGGAGGCTGGAGCTGATA
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