CX286881

Overview
NameCX286881
Unique NameCX286881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.198e-12
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            YRGVR+R WGK+ AEIR P  + +R+WLGTF++   AA AYD AAF++RG  A LNFP
Sbjct:   71 YRGVRQRHWGKWVAEIRLPKNR-TRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFP 127          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.198e-12
Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILN 445
            +RGVR+R WGK+ AEIR+P R G+R+WLGTF++ V+AA AYD AA ++ G +A LN
Sbjct:   34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.176e-12
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  230 QKRSEPKLADTEERKH--YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            ++R     + +   +H  YRGVR R WGK+ +EIR P RK +R+WLGTF +   AA+A+D AA  ++G  A+LNFP
Sbjct:   61 RRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQP-RKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 135          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.176e-12
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 469
            +RGVR+R WGK+ AEIR+P + G+R+WLGTF +   AA AYD AA  M G  A LNFP   G++
Sbjct:   78 FRGVRQRIWGKWVAEIREP-KIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVGSE 140          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  236 RSEPKLADTEERK----HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            +S  K    EE+K     Y GVRRRPWG+YAAEIR+P  K  R WLGTFD+  +AA AYD AA  + G  A  NF
Sbjct:    3 KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTK-ERHWLGTFDTAEEAAFAYDVAARSISGSLATTNF 76          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF69_ARATH (Ethylene-responsive transcription factor ERF069 OS=Arabidopsis thaliana GN=ERF069 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  260 TEERKHYRGVRRRPWGKYAAEIRDPARKG--SRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 448
            T  +K +RGVR+RPWGK+AAEIR    KG   R+WLGTF++  +AA AYD+AA ++ G  A  NF
Sbjct:   69 TANKKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            Y+G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP
Sbjct:   21 YKGIRMRKWGKWVAEIREP-NKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFP 77          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: DRE2H_ARATH (Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 2
Query:  278 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 454
            Y GVR+R WGK+ AEIR+P R G+++WLGTF S  +AA AYD A+  + G+ A LN PL
Sbjct:   67 YTGVRQRTWGKWVAEIREPGR-GAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNLPL 124          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2
Query:  272 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 454
            K +RGVR+R WG + +EIR P  K  RVWLGTFD+   AA+AYD AA  M G+ A  NFP+
Sbjct:    5 KKFRGVRQRQWGSWVSEIRHPLLK-RRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64          
BLAST of CX286881 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 2
Query:  263 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 451
            +  + ++G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP
Sbjct:   16 KRERPFKGIRMRKWGKWVAEIREP-NKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77          
The following BLAST results are available for this feature:
BLAST of CX286881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ERF56_ARATH3.198e-1260.34Ethylene-responsive transcription factor ERF056 OS... [more]
DRE2G_ARATH3.198e-1258.93Dehydration-responsive element-binding protein 2G ... [more]
ERF36_ARATH4.176e-1246.05Ethylene-responsive transcription factor ERF036 OS... [more]
DRE2B_ARATH4.176e-1254.69Dehydration-responsive element-binding protein 2B ... [more]
ERF88_ARATH7.124e-1253.33Ethylene-responsive transcription factor ERF088 OS... [more]
ERF69_ARATH7.124e-1253.85Ethylene-responsive transcription factor ERF069 OS... [more]
ERF10_ARATH7.124e-1255.17Ethylene-responsive transcription factor ERF010 OS... [more]
DRE2H_ARATH7.124e-1255.93Putative dehydration-responsive element-binding pr... [more]
SHN3_ARATH9.304e-1255.74Ethylene-responsive transcription factor SHINE 3 O... [more]
ERF11_ARATH9.304e-1249.21Ethylene-responsive transcription factor ERF011 OS... [more]

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Properties
Property NameValue
Genbank descriptionC01002B06Rv Veg1 Citrus clementina cDNA clone C01002B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286881 ID=CX286881; Name=CX286881; organism=Citrus clementina; type=EST; length=470bp
CAACATGACAACGTTGGAAGAAGAATCATCCATCCTGGAATTCATTCGCC
AGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTCTCTTTT
CTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACCCGACTC
CCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAACGTGTT
TGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAGCCGAAG
CTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAGAAGGCC
GTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGGGCAGCA
GGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAAGCTTAT
GATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAATTTCCC
TCTGGAGGCTGGAGCTGATA
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