CX286896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.022e-26 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 381 A+GGR AEE++F E TTGA +D Q +++AR MV FG S K+G V G G+PFLG+ M +Q DYS A +D EVR+L+E A+T A +I+T + D+L LA L+EKET+ E S+F D Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.022e-26 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 381 A+GGR AEE++F E TTGA +D Q +++AR MV FG S K+G V G G+PFLG+ M +Q DYS A +D EVR+L+E A+T A +I+T + D+L LA L+EKET+ E S+F D Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.022e-26 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 381 A+GGR AEE++F E TTGA +D Q +++AR MV FG S K+G V G G+PFLG+ M +Q DYS A +D EVR+L+E A+T A +I+T + D+L LA L+EKET+ E S+F D Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 9.022e-26 Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 A+GGR AEE +FG++ VTTGA D QV+ +ARQMV RFG S +G +++ GG FLG + ++ +YS A +DA+VR+L E + A++I+ +++ +L LLIEKET+DGEEF + Sbjct: 488 AMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24 Identity = 58/129 (44.96%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVA-IGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 LGGRVAEEV FGE V+TGA NDF + + +AR+MV +G S+K+G + I G GG FLG+ + ++++YS A A +D EV+ +++ Y R KQI+ + D L +A+ L++ ET+D E+ SL +GK Sbjct: 484 LGGRVAEEVTFGE--VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.950e-24 Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLF 375 A+GGR AEE++F E TTGA +D + +++AR MV FG S K+G V G G+PFLG+ M +Q DYS A +D EVR+L+E A+T A +I+T + D+L LA L+EKET+ E +F Sbjct: 480 AMGGRAAEELVFREP--TTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.466e-24 Identity = 57/128 (44.53%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIG-GPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG 384 LGGRVAEE+IFGE V+TGA NDF + + +AR+MV FG S+K+G + G GG FLG+ +++++YS A +D E++ +++ Y RAKQI+T + D L +AQ L++ ET+D E+ L G Sbjct: 479 LGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.444e-24 Identity = 53/122 (43.44%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 7 GGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 GGR+AEE+I+G E+V+TGASND + +AR MV ++GFS+K+G + G FLG+ ++ K S TA ++D EV+ L+E Y RA+QI+T ++DILH + L++ ET+D + L Sbjct: 471 GGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.444e-24 Identity = 53/122 (43.44%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 7 GGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 GGR+AEE+I+G E+V+TGASND + +AR MV ++GFS+K+G + G FLG+ ++ K S TA ++D EV+ L+E Y RA+QI+T ++DILH + L++ ET+D + L Sbjct: 471 GGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.103e-23 Identity = 52/122 (42.62%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 7 GGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 GGR+AEE+I+G E+V+TGASND + +AR MV ++GFS+K+G + G FLG+ ++ K S TA ++D EV+ L+E Y RA+Q++T ++DILH + L++ ET+D + L Sbjct: 471 GGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592 The following BLAST results are available for this feature:
BLAST of CX286896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286896 ID=CX286896; Name=CX286896; organism=Citrus clementina; type=EST; length=475bpback to top |