CX286896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15 Identity = 44/121 (36.36%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFM 366 LGGR AEEV+ G ++TGA ND +V+++ V +GFS+K+G ++ P K YS TA ++D EVRE V AY + ++IT H + + K+A++L+EKE + ++ + Sbjct: 656 LGGRAAEEVLIGR--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLV 768
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.085e-14 Identity = 43/131 (32.82%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 396 +GGR AEE+++G++ +T+GA ND + ++VAR+MV FG S +IG V++ + + S AT +V++E++ L+E +Y R+ ++ +H L LA L++ E + EE M+ + G +L Sbjct: 586 MGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL------------EAEMDNLSPATRALVESEIKSLLEASYERSLSLLKSHKKELDALATALVDYEFLTAEE-MNRVVKGDRDL 703
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.556e-14 Identity = 40/119 (33.61%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 360 +GGR AE +I+G+EN++TGAS+D + +++AR+MV +G S +G + NPFLG+ S+ + A +D E+R+++ + A + I ++++L + L+E ET+ EE Sbjct: 530 MGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDY-SKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.556e-14 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 378 +GGRVAEE+IFG +++TTGAS+D Q + +A+ MV G S+ IG V I ++ S +DAEV +L+ AY R K ++ H LH LA L+E ET+ E+ + + Sbjct: 676 MGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGPVHI---------------KERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRILL 785
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.922e-14 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETV 348 A+GGR AEE I+G +TTGAS+DF + + +AR MV + G S K+GQV P G S+ K YS TA +D E+ ++E Y +AK II ++ L L + L+ ET+ Sbjct: 549 AMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQY-----VPSQGTLPSNVKLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 360 +GG++AEE+I+G++N T+G +D + AR MV ++G S +G V + + + +S D+ D EV EL++ + RA++++T LH+LAQ LIE ET+D E Sbjct: 596 MGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLS------------ENWESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.351e-13 Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 +GGRV EE++FG + VT GA++DF + + +A+ MV+RFGFS KIG I + + AT D++D EV +L+ + TR + ++++ LA+ L+ ET+ +E +++ Sbjct: 481 MGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD-----------TQDEQLGEATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAV 592
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.932e-13 Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 ALGGRV+EE+ F +VT+GA +DF +V+++A MV G S KIG ++ GN K +S TA +D EV+ +V+ A+ +++T ++D + +A+ L+ KE + E+ + L Sbjct: 613 ALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN------FKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRL 728
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.135e-13 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETV 348 A+GGR AEE I+G +TTGAS+DF + + +AR MV + G S K+GQV P G K +S TA +D E+ ++E Y +A+ II T+ L L + L+ ET+ Sbjct: 546 AMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQY-----VPSQGTVPPGTKLFSEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETI 655
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.135e-13 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 360 LGGR AE+V+ G ++TGA ND +V+++ V +GFS KIG ++ F ++ K YS T ++D EVRE V AY R ++I H + + ++A+LL+EKE + ++ Sbjct: 648 LGGRAAEQVLIGR--ISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLS--------FPQREDEFSKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDD 756 The following BLAST results are available for this feature:
BLAST of CX286896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286896 ID=CX286896; Name=CX286896; organism=Citrus clementina; type=EST; length=475bpback to top |