CX286910

Overview
NameCX286910
Unique NameCX286910
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9976 contig Ccv1_Contig9976:306..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = -2
Query:  207 VVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKE 503
            VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F+VGES+  +  LV+ YYK     P  +++ D L E
Sbjct:   70 VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGYYKGEEVSPRLVFLKDGLVE 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_PLAF7 (Translationally-controlled tumor protein homolog OS=Plasmodium falciparum (isolate 3D7) GN=TCTP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = -2
Query:  201 VVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 503
            V+DIVD+F+L    AF KK +  Y+K +++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  ++++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-AFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = -2
Query:  198 VDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 500
            VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   66 VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = -2
Query:  201 VVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 503
            V+DIVD+F+L    +  KK +  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAE (Translationally-controlled tumor protein homolog OS=Aedes aegypti GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = -2
Query:  201 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 500
            VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPVLLCFKHGLEEEK 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_DROPS (Translationally-controlled tumor protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Tctp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.652e-12
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  198 VDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 500
            VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   66 VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREIDGQSIPVLMFFKHGLEEEKC 172          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.652e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = -2
Query:  198 VDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 500
            VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   66 VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.652e-12
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = -2
Query:  201 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 500
            VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPILLCFKHGLEEEK 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.688e-12
Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = -2
Query:  198 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 500
            VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:   68 VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
BLAST of CX286910 vs. ExPASy Swiss-Prot
Match: TCTP_ANOGA (Translationally-controlled tumor protein homolog OS=Anopheles gambiae GN=Tctp PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.688e-12
Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = -2
Query:  201 VDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 500
            VDIV   RL E    DKK F TY+K ++K L  +L E+     E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFSDKKQFTTYLKDYMKKLVTRLEEKSPGEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESVPVLLCFKHGLEEEK 170          
The following BLAST results are available for this feature:
BLAST of CX286910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
TCTP_THEAN2.986e-1238.24Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAF72.986e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_DROYA2.986e-1239.25Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH5.093e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAE5.093e-1240.95Translationally-controlled tumor protein homolog O... [more]
TCTP_DROPS6.652e-1238.32Translationally-controlled tumor protein homolog O... [more]
TCTP_DROME6.652e-1239.25Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL6.652e-1240.95Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA8.688e-1237.50Translationally-controlled tumor protein homolog O... [more]
TCTP_ANOGA8.688e-1240.95Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionC01002D12Rv Veg1 Citrus clementina cDNA clone C01002D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286910 ID=CX286910; Name=CX286910; organism=Citrus clementina; type=EST; length=507bp
TTTTTTTTTTTTTTTTTTTCAAACCATAAAACCCAATAATTAAGAGCAGA
AAAACATATTGTTTATGTCAAAATAAAAACTAAAAAACAGCAAGCACAAG
TCCCGAGTAAACCAGCACAAAAGATACATAAAAATAACCGCGGGCAATAA
TTAAAATTAGAACTACAGCAGGCACTTCCTCTTCGAAGCCCAGCTTAGCA
CTTCACCTCCTTCAATGCATCAGCCATATACAAAAATGTTGGGTCGGTCG
CACCTTCCTTGTAGTAAGCAAAGACAAGACAGCCATCATCATGCATGCTC
TCCCCAACAAAGAATTGAAGGTCACTGAGCTTCGAGAGCAAGAACTTGGT
CGCTCCCTCAATATTCTTCTTAAATATCTCCTGCCTCTCCTCACTCAGCT
TGGGCGTCAGCAACTTGATGAATCTCTTCATGTATGTTACAAACGGCTTC
TTGTCAAAAGCGGGTTGCTCCTGTAGCCTGAATGTGTCGACAATGTCAAC
CACCTTC
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