CX286918

Overview
NameCX286918
Unique NameCX286918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length492
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = -1
Query:  229 KGMNVTAYSPLG-------AVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKIN 483
            +G+ VTAYS  G       +V     S  + E++ +K IAE HG+T AQV LRW  ++G+ V+ +S NP+RLKQNL +  W L +++   I+
Sbjct:  207 EGLTVTAYSSFGPLSFLELSVQNAVDSPPLFEHQLVKSIAEKHGRTPAQVLLRWATQRGIAVIPKSNNPQRLKQNLDVTGWNLEEEEIKAIS 298          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.578e-13
Identity = 33/86 (38.37%), Postives = 58/86 (67.44%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C  KG+ VTAYSPLG+    W   +   ++E+  +K+IA  H KT AQV +R+ +++ V V+ +S+ P R+ +N+ +FD++L+D++
Sbjct:  200 CHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEE 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = -1
Query:  229 GMNVT--AYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKIN 480
            G N+   AY PLG         +++++ A+  IAEAHG+T AQV LRW ++ G  V+ RS NPER+  NL +F +ELT D+ + +N
Sbjct:  187 GYNIVTEAYGPLGV-------GRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLN 265          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = -1
Query:  229 GMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKIN 480
            G+   AY PLG         +++++ A+  +A+AH KT AQV LRW ++ G  V+ RS NP+R+  NL +FD+ELTDD+   +N
Sbjct:  189 GIVTEAYGPLGV-------GRLLDHAAVTGVAQAHDKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLN 265          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C+ KG+ VTAYSPLG+    W   +   ++E+  +K IA  H KT AQV +R+ +++ + V+ +S+ PER+ +N  +FD+EL+  D
Sbjct:  200 CQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQD 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AKCL2_MOUSE (1,5-anhydro-D-fructose reductase OS=Mus musculus GN=Akr1e2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 30/87 (34.48%), Postives = 61/87 (70.11%), Query Frame = -1
Query:  232 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKI 492
            C  + ++VTAY PLG  G   G   +M++  +++IA+ HGK+ AQ+ +R+ +++ + V+ +S+ P R+++N+ +FD+ELT+ D +++
Sbjct:  191 CHKRNVSVTAYRPLGGSG---GGFHLMDDTVIRKIAKKHGKSPAQILIRFQIQRNLIVIPKSVTPSRIRENIQVFDFELTEKDMEEL 274          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 34/90 (37.78%), Postives = 59/90 (65.56%), Query Frame = -1
Query:  232 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKI 492
            CK KG+ VTAYSPLG+    W   +   ++E+  +K IA  + KT AQV +R+ +++ + V+ +S+ PER+ +N  +FD+EL+ +D + +
Sbjct:  200 CKSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDMNTL 289          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 33/90 (36.67%), Postives = 58/90 (64.44%), Query Frame = -1
Query:  232 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKI 492
            C  KG+ VTAYSPLG+    W   +   ++E+  +K IA+ + KT AQV +R+ +++ + V+ +S+ PER+ +N  +FD+EL  +D + +
Sbjct:  199 CNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQRNLIVIPKSVTPERIAENFQVFDFELDKEDMNTL 288          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALD2_CRIGR (Aldose reductase-related protein 2 OS=Cricetulus griseus GN=AKR1B8 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 33/86 (38.37%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C  KG+ VTAYSPLG+    W   +   ++E+  +K+IA  H KT AQV +R+ +++ V V+ +S+ P R+ +N  +FD++L+D +
Sbjct:  200 CHSKGITVTAYSPLGSPNRPWAKPEDPSLLEDPKIKEIAAKHKKTSAQVLIRFHIQRNVVVIPKSVTPARIHENFQVFDFQLSDQE 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = -1
Query:  223 GMNVTAYSPLGAVG-------TRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQI 480
            G+ +T YS  G              +  + E+E +K IA+ HGK+ AQV LRW  ++ + V+ +S NPERL QNL + D++LT DD D I ++
Sbjct:  213 GIAITGYSSFGPQSFLELESKRALNTPTLFEHETIKSIADKHGKSPAQVLLRWATQRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305          
The following BLAST results are available for this feature:
BLAST of CX286918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
XYL1_ASPNG5.615e-1340.22NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
AK1BA_HUMAN9.578e-1338.37Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
Y2407_MYCS21.251e-1243.02Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
Y1918_MYCSJ1.251e-1241.67Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
ALDR_HUMAN1.251e-1239.53Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
AKCL2_MOUSE1.251e-1234.481,5-anhydro-D-fructose reductase OS=Mus musculus G... [more]
ALDR_PIG1.634e-1237.78Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
ALDR_BOVIN1.634e-1236.67Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]
ALD2_CRIGR1.634e-1238.37Aldose reductase-related protein 2 OS=Cricetulus g... [more]
XYL2_CANTR2.134e-1238.71NADPH-dependent D-xylose reductase II,III OS=Candi... [more]

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Properties
Property NameValue
Genbank descriptionC01002E08Rv Veg1 Citrus clementina cDNA clone C01002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286918 ID=CX286918; Name=CX286918; organism=Citrus clementina; type=EST; length=492bp
CTCGTGCCGATTTTTTTTTACAAAAGTGTTTGCATTTCCATCATTATTAA
AATTCAAATTATAGAACCTTACATTTGAAATTAATTATTACATTTCATAT
AATTTTTGGAATATTTGTATTTCGAAAGTCTGAAACTAGCCATCATTCCA
CAGCTCCTCAGGGGTCTTGAATGGTCCATGAGGGGAAATAAGGAAATCAC
TTGGTATCAATCTACGCTGTGCGATTTGATTAATCTTGTCATAGTCGTCA
TCAGTTAATTCCCAATCGAAGATCCCCAGGTTCTGCTTCAATCTCTCTGG
ATTGAGGCTCCTGACAACAACTGTCACTCCTTGCTCAACTATCCATCTAA
GAGAAACCTGAGCGACAGTCTTGCCATGAGCCTCTGCAATCTGCTTTAGT
GCTTCATTCTCCATGACTTGATTGCTTCCCCATCTTGTCCCTACGGCTCC
CAAAGGTGAGTACGCCGTGACATTCATGCCCTTGACCTTGCA
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