CX286918

Overview
NameCX286918
Unique NameCX286918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length492
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12
Identity = 32/87 (36.78%), Postives = 65/87 (74.71%), Query Frame = -1
Query:  232 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKI 492
            C  + ++VTAY PLG  G+R G + +M++  +++IA+ HGK+ AQ+ +R+ +++ + V+ +S+NP R+++N+ +FD+ELT+ D +++
Sbjct:  191 CHGRNVSVTAYRPLG--GSRDGVH-LMDDIVIRKIAKKHGKSPAQILIRFQIQRNLIVIPKSVNPSRIRENIQVFDFELTEKDMEEL 274          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = -1
Query:  223 GMNVTAYSPLGAVG-------TRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQI 480
            G+ +T YS  G              +  + E+E +K IA+ HGK+ AQV LRW  ++ + V+ +S NPERL QNL + D++LT DD D I ++
Sbjct:  213 GIAITGYSSFGPQSFLELESKRALNTPTLFEHETIKLIADKHGKSPAQVLLRWATQRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 33/102 (32.35%), Postives = 62/102 (60.78%), Query Frame = -1
Query:  202 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQ--RRLIP 492
            C  +G+ VTAYSPLG+    W       ++E   +  +AE HG++ AQ+ LRW V++ V  + +S+NP R+ QN+ +FD+  + ++  +++ + +  R ++P
Sbjct:  200 CHARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVP 301          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 34/102 (33.33%), Postives = 62/102 (60.78%), Query Frame = -1
Query:  202 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQ--RRLIP 492
            C+ +G+ VTAYSPLG+    W       ++E   +K++AE + K+ AQ+ LRW  ++ V  + +S+ P R+ QNL +FD+ LT+++   +  + +  R ++P
Sbjct:  202 CQKRGLVVTAYSPLGSPDRMWKHPDEPVLLEEPGIKKLAEKYKKSPAQILLRWQAQRKVVTIPKSVTPARILQNLQVFDFSLTEEEMSHVGSLNKNWRYIVP 303          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12
Identity = 32/86 (37.21%), Postives = 57/86 (66.28%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C  KG+ VTAYSPLG+    W   +   ++E+  +K+IA  + KT AQV +R+ +++ + V+ +S+ P R+ +N  +FD+EL+++D
Sbjct:  200 CHCKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKEIAAKYNKTTAQVLIRFPIQRNLVVIPKSVTPARIAENFKVFDFELSNED 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12
Identity = 33/86 (38.37%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C  KG+ VTAYSPLG+    W   +   ++E+  +K IA+ H KT AQV +R+ +++ + V+ +S+ P R+ +N  +FD+EL+ +D
Sbjct:  200 CHSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIADKHKKTTAQVLIRFPMQRNLVVIPKSVTPARIAENFQVFDFELSSED 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.208e-12
Identity = 34/87 (39.08%), Postives = 60/87 (68.97%), Query Frame = -1
Query:  232 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKI 492
            C+ + ++VTAY PLG  G+  G + +++N  +K+IA+ HGK+ AQ+ +R+ +++ V V+  S+ P  +K+N+ +FD+ELT  D D I
Sbjct:  210 CQSRDVSVTAYRPLG--GSCEGVD-LIDNPVIKRIAKEHGKSPAQILIRFQIQRNVIVIPGSITPSHIKENIQVFDFELTQHDMDNI 293          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALD2_MOUSE (Aldose reductase-related protein 2 OS=Mus musculus GN=Akr1b8 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 32/86 (37.21%), Postives = 59/86 (68.60%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAV---GTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C  KG++VTAYSPLG+      +     ++E+  +K+IA  H KT AQV +R+ +++ V V+ +S+ P R+++N+ +FD++L+D++
Sbjct:  200 CHSKGISVTAYSPLGSPDRPSAKPEDPSLLEDPKIKEIAAKHEKTSAQVLIRFHIQRNVVVIPKSVTPSRIQENIQVFDFQLSDEE 285          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 32/102 (31.37%), Postives = 62/102 (60.78%), Query Frame = -1
Query:  202 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQ--RRLIP 492
            C+ +G+ VTAYSPLG+    W       ++E   +  +AE HG++ AQ+ LRW V++ V  + +S+ P R+ QN+ +FD+  + ++  +++ + +  R ++P
Sbjct:  200 CQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSITPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVP 301          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 32/102 (31.37%), Postives = 62/102 (60.78%), Query Frame = -1
Query:  202 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQ--RRLIP 492
            C+ +G+ VTAYSPLG+    W       ++E   +  +AE +G++ AQ+ LRW V++ V  + +S+ P R+ QN+ +FD+  + ++  ++N + +  R ++P
Sbjct:  200 CQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNALNKNWRYIVP 301          
The following BLAST results are available for this feature:
BLAST of CX286918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
AKCL2_RAT2.134e-1236.781,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]
XYL1_CANTR3.640e-1238.71NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
AK1A1_MOUSE3.640e-1232.35Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_CHICK3.640e-1233.33Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
ALDR_RAT4.754e-1237.21Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
ALDR_RABIT4.754e-1238.37Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
AKCL2_HUMAN6.208e-1239.081,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
ALD2_MOUSE8.108e-1237.21Aldose reductase-related protein 2 OS=Mus musculus... [more]
AK1A1_RAT1.059e-1131.37Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_HUMAN1.059e-1131.37Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]

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Properties
Property NameValue
Genbank descriptionC01002E08Rv Veg1 Citrus clementina cDNA clone C01002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286918 ID=CX286918; Name=CX286918; organism=Citrus clementina; type=EST; length=492bp
CTCGTGCCGATTTTTTTTTACAAAAGTGTTTGCATTTCCATCATTATTAA
AATTCAAATTATAGAACCTTACATTTGAAATTAATTATTACATTTCATAT
AATTTTTGGAATATTTGTATTTCGAAAGTCTGAAACTAGCCATCATTCCA
CAGCTCCTCAGGGGTCTTGAATGGTCCATGAGGGGAAATAAGGAAATCAC
TTGGTATCAATCTACGCTGTGCGATTTGATTAATCTTGTCATAGTCGTCA
TCAGTTAATTCCCAATCGAAGATCCCCAGGTTCTGCTTCAATCTCTCTGG
ATTGAGGCTCCTGACAACAACTGTCACTCCTTGCTCAACTATCCATCTAA
GAGAAACCTGAGCGACAGTCTTGCCATGAGCCTCTGCAATCTGCTTTAGT
GCTTCATTCTCCATGACTTGATTGCTTCCCCATCTTGTCCCTACGGCTCC
CAAAGGTGAGTACGCCGTGACATTCATGCCCTTGACCTTGCA
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