CX286938

Overview
NameCX286938
Unique NameCX286938
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length573
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.098e-38
Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = 1
Query:   49 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            N AA L G N ++I+ + +P +   +VL+++  VG+CGSDV    T      V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E +   S    G L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+G+GP
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGP 178          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.873e-38
Identity = 78/154 (50.65%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  112 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            L P DVL+ ++ VGVCGSDVH+    ++  FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P  +   +PPVHGCL  +VVHPA   ++LPD+VS  EGAM EP ++GV A  RA I P     +MG+GP
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEPFAIGVQAALRAGIRPGDVGAVMGAGP 177          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.990e-36
Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  112 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSG 570
            LG  DV +++  VG+CGSDVH+ +  R+  FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   Q    + G YNL P  +   +PP+ GCL   V+HPA   FKLPDNVS  +GAM EPL++G+ +  +A I P    L++G+G
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEPLAIGMQSATKAGIKPGDIGLVIGAG 177          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.661e-36
Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  112 LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            LGP DV +R   VG+CGSDVH+    ++  FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P  +   +PP+HGCL  +V+HPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    ++ G+GP
Sbjct:   28 LGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAALRARIQPGDIAVVTGAGP 181          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.306e-35
Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = 1
Query:   82 LKIQPLELP-SLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            L ++ + LP  +GP DV + +  VGVCGSDVH+     +  +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P+     +PPVHG LA   VHPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    +++G GP
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAASRARIVPGDVAVVVGCGP 176          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35
Identity = 73/176 (41.48%), Postives = 107/176 (60.80%), Query Frame = 1
Query:   49 NMAAWLMGVNTLKIQPLELPSL-GPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            N A  L  V  + I+   +P++  P+ V + +KA G+CGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP      +PP+ G L    + P D   KLP+ VS EEGA  EPLSVGVH+ + A +   T V++ G+GP
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGP 181          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34
Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 1
Query:   49 NMAAWLMGVNTLKIQPLELPSL-GPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            N A  L  V  + I+   +P++  P+ V + +KA G+CGSD+H+ ++  +  +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP      +PP+ G L    + P D   KLP+ VS EEGA  EPLSVGVH+ + A +   T V++ G+GP
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGP 181          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.773e-34
Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 1
Query:  118 PYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            P +V++++KA G+CGSD+H+    R+A++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P  K   +PP  G L        D  +KLPD+VS EEGA+ EPLSV +HA + A I      ++ G+GP
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEPLSVAIHANKLAKIKFGARCVVFGAGP 182          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.369e-33
Identity = 72/179 (40.22%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   49 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVV-KEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPP-VHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSG 570
            N  A L    T+KI   E+P     +VL++++ VG+CGSDVH  ++     F+  K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C YC  G+YN+CP+   + + P   G L + + HP    +KLPDN+   EGA+ EP +VG+HA   A++ P   ++I+G+G
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFES---GPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAG 178          
BLAST of CX286938 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.536e-32
Identity = 76/183 (41.53%), Postives = 104/183 (56.83%), Query Frame = 1
Query:   49 NMAAWLMGVNTLKIQPLELPSLG-PYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE-------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGP 573
            N +  L  ++ +  +  + P +  P DVLV++K  G+CGSD+HF    R+ +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP        +   G P   G L      P D   KLPD+VSLE GA+ EPLSVGVHA +  ++     V + G+GP
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEPLSVGVHASKLGSVAFGDYVAVFGAGP 186          
The following BLAST results are available for this feature:
BLAST of CX286938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
DHSO_BOMMO1.098e-3844.00Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
XYLD_RHIME1.873e-3850.65Putative D-xylulose reductase OS=Rhizobium melilot... [more]
XYLD_MORMO2.990e-3648.37D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
XYLD_AGRT56.661e-3647.40Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_RHILO3.306e-3544.85Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
DHSO1_YEAST7.364e-3541.48Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST3.655e-3440.91Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
XYL2_YEAST4.773e-3446.71D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
YDJJ_ECOLI2.369e-3340.22Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_PICST1.536e-3241.53D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]

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Properties
Property NameValue
Genbank descriptionC01002G06Rv Veg1 Citrus clementina cDNA clone C01002G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286938 ID=CX286938; Name=CX286938; organism=Citrus clementina; type=EST; length=573bp
GGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAA
CATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTTGG
AGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCGTT
GGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCCGA
TTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGTCA
TAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTG
GCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGAGG
TCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTC
ATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAG
CTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAG
TGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATG
TGCTTATCATGGGATCAGGGCCC
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