CX286961

Overview
NameCX286961
Unique NameCX286961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14 contig Ccv1_Contig14:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.866e-34
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 2
Query:  152 PGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            P N T+ AV  FGDS+ DTGNNNNL+T  K N+ PYG DF+   ATGRFSNG V SD LA+ +GVKE+  AYLDP ++P DLLTGV+FASGG GY+P TT          DQL  F++YI+K+  +V +E
Sbjct:  197 PENKTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNP-TTSEAANAIPMLDQLTYFQDYIEKVNRLVRQE 325          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.210e-33
Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 2
Query:  167 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNR 553
            + AVI FGDSI+DTGNNN L T  K NF PYGRDF    ATGRF NG++P+D++AE LG+K +  AY  P L+P D+LTGV+FASGG G DP+T R         DQL  FK YI KL +I G+E K R
Sbjct:   26 IPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTAR-IQGVIWVPDQLNDFKAYIAKLNSITGDEEKTR 153          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 76/131 (58.02%), Postives = 90/131 (68.70%), Query Frame = 2
Query:  155 GNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGK 547
            G+V VSA+  FGDSI+DTGNNNNL T +KCNF PYGR+F GG ATGRF NG+V SD++AE L VK+L  AY DP L   DL TGV FASGG G D  T R         DQ++ FKEYI KL  +V ++ K
Sbjct:   29 GSVAVSALFAFGDSILDTGNNNNLNTLSKCNFFPYGRNFIGGKATGRFGNGRVFSDMIAEGLNVKKLLPAYRDPNLSKNDLPTGVCFASGGSGLDERTAR-SQGVIWVPDQVKDFKEYIMKLNGVVRDKRK 158          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 82/164 (50.00%), Postives = 101/164 (61.59%), Query Frame = 2
Query:   86 FLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG-EEGKNRIFERSFF 574
            F +L + S + LF    A     GN TVSA+  FGDSI+DTGNNN L + +K NF PYGRDF GG ATGRF NG+V SDI+AE LG+K L  AY DP L   DL TGV FASGG G DP+T R         DQ+  F+ YI +L  +VG +E  N +   + +
Sbjct:    7 FKMLLAFSFISLFYVGNAQQSY-GNSTVSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITAR-TTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVY 168          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31
Identity = 71/143 (49.65%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  137 AVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFER 565
            A  K   N T  A+  FGDSI+DTGNN+ + T  K NF PYG +F     TGRF NGK+PSD +A+ +GVK +  AYL P L  EDLLTGV+FASGG GYDPLT            QL  F+EYI+K++  VG+E    I  +
Sbjct:   66 ATTKRTHNTTFPAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTP-IVVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISK 207          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.339e-31
Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  152 PGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDP------TLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFER 565
            P N T+ AV  FGDSI DTGNNNNL T  KCN+ PYG DF  G ATGRFSNG+V SD +++ LGVKE+  AY+D        L+  DLLTGV+FASGG GY P T+          DQL  F++Y  +++ +VG++   +I  +
Sbjct:  118 PQNKTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSE-SWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSK 260          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 73/171 (42.69%), Postives = 97/171 (56.73%), Query Frame = 2
Query:   65 SFSDASIFLILFSVSVLDLFCRTEAVIKLPGNV-TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            S+    +FL LF +S      + E     P    +VSA++VFGDS VD GNNN + T  KCNFPPYG DF     TGRF NG++ +D +A  +GVKE    YLDP L   +L++GV+FAS G GYDPLT            QL+ F+EY  KL   +G++   +  E + F
Sbjct:   10 SYVSFILFLFLFFISFSSSTSKLEPAKSEPKRKHSVSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLTP-TITNVIDIPTQLEYFREYKRKLEGKMGKQEMEKHIEEAMF 179          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 70/165 (42.42%), Postives = 94/165 (56.97%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            S+F ILF +++        + +   G +   A+IVFGDS VD GNNN + T A+ NF PYGRDF GG  TGRF NGK+ +D ++E LG+K +  AYLDP+    D  TGV FAS   GYD  T+           QL+ +KEY  KL+A  G++      E S +
Sbjct:    6 SLFTILFLIAM-------SSTVTFAGKIP--AIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS-DVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLY 160          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  155 GNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIF 559
            G   V A+I+ GDS+VD GNNN+  T  K NFPPYGRDF   +ATGRFSNGK+ +D  AE LG     +AYL       +LLTG NFASG  G+D   T           QL+ +KEY +K+  IVG+E  N IF
Sbjct:   24 GETLVPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDD-ATAIFYNAITLSQQLKNYKEYQNKVTNIVGKERANEIF 157          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 2
Query:   83 IFLILFSVSVLDLFCRT-EAVIKLPGNVTVS---AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            I +I+F +     F  T  A +    NV VS   A++VFGDS +DTGNNN +KT  + NFPPYG +F G  ATGRFSNGK+  D +A  +G+K+    +LDP L   D++TGV FAS G GYD LT R          Q  + + Y+++L  IVG+E
Sbjct:    3 IHVIIFMIITTMQFSTTCHAYVINVTNVNVSMFPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTDR-ATSTLSVDKQADMLRSYVERLSQIVGDE 158          
The following BLAST results are available for this feature:
BLAST of CX286961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
APG_ARATH1.866e-3456.15Anter-specific proline-rich protein APG OS=Arabido... [more]
GDL89_ARATH1.210e-3356.59GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL5_ARATH4.597e-3358.02GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL30_ARATH1.747e-3250.00GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
GDL4_ARATH4.302e-3149.65GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
APG_BRANA7.339e-3149.31Anther-specific proline-rich protein APG (Fragment... [more]
GDL86_ARATH6.212e-3042.69GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL34_ARATH1.172e-2842.42GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL72_ARATH4.452e-2848.89GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL1_ARATH4.452e-2844.59GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01003A07SK Veg1 Citrus clementina cDNA clone C01003A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286961 ID=CX286961; Name=CX286961; organism=Citrus clementina; type=EST; length=608bp
TAAGGACATATTTCTGAACTCTTCATATATTTTCCATGCGATGCAGTTTC
TGCCAATGAAGCTGTCTTTTTCTGATGCCTCCATTTTTTTAATTTTGTTT
TCTGTTTCTGTTTTGGATCTTTTTTGCAGAACAGAAGCAGTTATTAAGCT
ACCGGGCAATGTTACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCG
TTGATACAGGCAATAACAATAATCTGAAAACGCCGGCTAAATGTAATTTT
CCTCCTTATGGGAGAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTC
TAATGGAAAGGTCCCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAG
AGCTTTCGCTAGCATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTC
ACAGGTGTAAACTTTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCAC
AAGACTTTCGGCAGCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCA
AGGAATATATAGACAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAAC
AGAATCTTTGAAAGAAGTTTTTTTTGGTGGTAGTAGGAAGCAATGACATA
AACAACAA
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