CX286961

Overview
NameCX286961
Unique NameCX286961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.594e-28
Identity = 67/135 (49.63%), Postives = 79/135 (58.52%), Query Frame = 2
Query:  155 GNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIF 559
            G   V A+I+ GDS+VD GNNN L T  K NFPPYGRDF    ATGRFSNGK+ +D  AE LG     + YL       +LLTG NFASG  GYD   T           QL+ +KEY +K+  IVG E  N+IF
Sbjct:   24 GEPLVPALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTNLLTGANFASGASGYDD-GTAIFYNAITLNQQLKNYKEYQNKVTNIVGSERANKIF 157          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.295e-27
Identity = 66/153 (43.14%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  119 LFCRTEAVIKLPGNVT-VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            L    + ++K+P       A+IVFGDS VD+GNNN + T  K NF PYGRD+  G ATGRFSNG++  D ++E LG+K    AYLDP     D  TGV FAS G G D  T+           +++ +KEY  +LR+ +GEE  N I   S +
Sbjct:   10 LLLAAQLLVKIPETCAKFPALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATS-AVLSVMPLWKEVEYYKEYQTRLRSYLGEEKANEIISESLY 161          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.429e-27
Identity = 63/136 (46.32%), Postives = 80/136 (58.82%), Query Frame = 2
Query:  167 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            + A+IVFGDS VD+GNNN + T A+ NF PYGRDF GG ATGRF NG++ SD  +E  G+K    AYLDP+    D  TGV FAS G GYD  +T           +++ FKEY   L A +G     +I   S +
Sbjct:   26 IPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDN-STADVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLY 160          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: EXL4_ARATH (GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana GN=EXL4 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.283e-26
Identity = 74/155 (47.74%), Postives = 91/155 (58.71%), Query Frame = 2
Query:   71 SDASIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG 535
            S  ++ L LFS      F  T+AV     N +  A++ FGDSI+DTGNNN L T  K N  PYGR F    ATGRF NG+V SDI+AE LG+K++  AY      P DL TGV FASGG G DP+T++         DQ+  FK YI KL+A  G
Sbjct:    3 SKITLVLTLFS----SYFISTDAV-----NGSFPALLAFGDSILDTGNNNFLLTFMKGNIWPYGRSFSMRRATGRFGNGRVFSDIVAEGLGIKKILPAYRKLFNSPSDLRTGVCFASGGAGVDPVTSK-LLRVLTPKDQVNDFKGYIRKLKATAG 147          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25
Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = 2
Query:   95 LFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            L ++ +L L   T A    P    ++A+  FGDS VD+GNNN + T  + N PPYG+ F    +TGRFS+GK+ +D +   LG+K    AYL+P++KP DLLTGV+FAS G G D  T +          Q   F+E + K++++VG+   NR+ + + F
Sbjct:   14 LINILLLQLLNLTNASPSPP----ITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAK-SSLTITMDKQWSYFEEALGKMKSLVGDSETNRVIKNAVF 168          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.068e-25
Identity = 69/165 (41.82%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNN-LKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSF 571
            +I L LF  + L   C  +A           A+++FGDS VDTGNNN  L T  +    PYG D   G A GRFSNGK+ SDI+A +L +KE    +L P L  +D+LTGV FAS G GYD LT+          +Q  +FK YI +L+ IVG++    I   +F
Sbjct:    6 AITLTLFITTTLLASC--DAAANATTKPLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTS-LSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAF 167          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25
Identity = 71/169 (42.01%), Postives = 92/169 (54.44%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVIKLPGNVTVS----AVIVFGDSIVDTGNNNN-LKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSF 571
            +I L LF  + L   C   A      N T      A+++FGDS VDTGNNN  L T  +    PYG D   G A GRFSNGK+ SDI+A +L +KE    +L P L  +D+LTGV FAS G GYD LT+          +Q  +FK YI +L+ IVG++    I   +F
Sbjct:    6 AITLTLFIATTLLAPCNAAA------NATTKPLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTS-LSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAF 167          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.341e-24
Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFE 562
            S FL+L  VS L       +++++     V A++ FGDS+VD GNNN L T  + ++PPYGRDF    ATGRF NGK+ +DI AE LG  +   AYL P    ++LL G NFAS   GYD               Q++ FKEY  KL  I G +  + I +
Sbjct:    6 SSFLLLTLVSTL-------SILQISFAQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFASAASGYDD-KAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIIK 158          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.094e-24
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  119 LFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAI 529
            +F R   ++ +     V A+ +FGDS+VD GNNN++ T  K NFPPYGRDF     TGRF NGK+ +D  AE LG K    AYL    K ++LL G NFAS   GY   T +          QL+ +K+YI +++ I
Sbjct:    2 VFERMVVMVVMKAQPLVPAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTAK-LYSAISLPQQLEHYKDYISRIQEI 137          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23
Identity = 67/152 (44.08%), Postives = 91/152 (59.87%), Query Frame = 2
Query:   95 LFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLD-PTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGK 547
            +F +S+  ++  + A  K   N + SA+  FGDS++DTGNNN L T  K N+ PYG  F+    TGRF NG+V +DI+AE L +K L  AY     +  EDL TGV FASGG G D LT+R         DQ++ FK+Y+ KLR +V  + K
Sbjct:    6 IFVLSLFSIYVLSSAAEK---NTSFSALFAFGDSVLDTGNNNFLLTLLKGNYWPYGLSFDYKFPTGRFGNGRVFTDIVAEGLQIKRLVPAYSKIRRISSEDLKTGVCFASGGSGIDDLTSR-TLRVLSAGDQVKDFKDYLKKLRRVVKRKKK 153          
The following BLAST results are available for this feature:
BLAST of CX286961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
GDL73_ARATH7.594e-2849.63GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL66_ARATH1.295e-2743.14GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL48_ARATH6.429e-2746.32GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
EXL4_ARATH9.283e-2647.74GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana ... [more]
GDL47_ARATH1.212e-2539.38GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL44_ARATH2.068e-2541.82GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL43_ARATH4.607e-2542.01GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
APG2_ARATH1.341e-2440.99GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL78_ARATH5.094e-2442.34GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
EXL6_ARATH1.135e-2344.08GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC01003A07SK Veg1 Citrus clementina cDNA clone C01003A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286961 ID=CX286961; Name=CX286961; organism=Citrus clementina; type=EST; length=608bp
TAAGGACATATTTCTGAACTCTTCATATATTTTCCATGCGATGCAGTTTC
TGCCAATGAAGCTGTCTTTTTCTGATGCCTCCATTTTTTTAATTTTGTTT
TCTGTTTCTGTTTTGGATCTTTTTTGCAGAACAGAAGCAGTTATTAAGCT
ACCGGGCAATGTTACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCG
TTGATACAGGCAATAACAATAATCTGAAAACGCCGGCTAAATGTAATTTT
CCTCCTTATGGGAGAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTC
TAATGGAAAGGTCCCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAG
AGCTTTCGCTAGCATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTC
ACAGGTGTAAACTTTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCAC
AAGACTTTCGGCAGCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCA
AGGAATATATAGACAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAAC
AGAATCTTTGAAAGAAGTTTTTTTTGGTGGTAGTAGGAAGCAATGACATA
AACAACAA
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