CX286961

Overview
NameCX286961
Unique NameCX286961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14 contig Ccv1_Contig14:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: EXL5_ARATH (GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 72/182 (39.56%), Postives = 97/182 (53.30%), Query Frame = 2
Query:   68 FSDASIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDIL---------------AEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            F    + L LFS+  L +    EAV     N +  A++ FGDS+VDTGNNN L T  K N+ PYG +F+    TGRF NG+V SD++               AE LG+K +  AY    + P DL TGV+FASGG G DP+T++         DQ++ FK Y  KL+ +VG     +I   S
Sbjct:    2 FRKKMLVLALFSIYFLSI----EAV----RNESFPALLAFGDSMVDTGNNNYLLTLMKGNYWPYGWNFDSKIPTGRFGNGRVFSDVVGIILKSSLQCFFVISAEGLGIKRIVPAYRKLYIAPSDLKTGVSFASGGAGVDPVTSK-LLRVLSPADQVKDFKGYKRKLKGVVGRSKAKKIVANS 174          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.936e-23
Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 2
Query:   92 ILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNN-NLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            I+F + V  L                 A+++FGDS VDTGNNN + +T  K    PYG D  G  A GR+SNGKV SD++A +L +KEL   +L P +  +D++TGV+FAS G GYD  ++           Q  +FK YI +L+ IVG++
Sbjct:    7 IVFGLFVATLLVSCNVAANATTQPLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQPNISHQDIVTGVSFASAGAGYDDRSS-LSSKAIPVSQQPSMFKNYIARLKGIVGDK 156          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 2
Query:   92 ILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNN-NLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            I F++ +  L    +A           A+++FGDS VDTGNNN + +T  K    PYG D     A+GRF+NGK+ SDI+A +L +K+    +L P L  ++++TGV FAS G GYD  T+          DQ ++FK YI +L++IVG++    I + +
Sbjct:    7 ITFTLFIAALLSSCDAATNATSQPLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGIDLPNHKASGRFTNGKIFSDIIATKLNIKQFVPPFLQPNLSDQEIVTGVCFASAGAGYDDHTS-LSTQAIRVLDQQKMFKNYIARLKSIVGDKKAMEIIKNA 165          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.768e-22
Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  104 VSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPA-KCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            V+ L + C  +A    P      A+++FGDS  DTGNNN       K N  PYG D  G  A GRFSNGK+ SD+++ +L +KE    +L P +  +D++TGV FAS G GYD   T           Q  +FK YI +L+ IVG++
Sbjct:   13 VATLLVSCNADANTTQP---LFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFASAGAGYDD-ETSLSSKAIPVSQQPSMFKNYIARLKGIVGDK 155          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.366e-21
Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = 2
Query:   68 FSDASIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNN-LKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            ++  +I   LF  + L   C   A  K        A+++FGDS VDTGNNN   +T  +    PYG D    +  GRFSNGK+ SDI+A +L +K+    +L P L  ++++TGV FAS G GYD  T+          +Q  +FK YI +L++IVG++   +I   +
Sbjct:    2 WTSKTISFTLFITTTLLGSCNASAKAKT--QPLFPAILIFGDSTVDTGNNNYPSQTIFRAKHVPYGIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFLQPNLTDQEIVTGVCFASAGAGYDDQTS-LTTQAIRVSEQPNMFKSYIARLKSIVGDKKAMKIINNA 166          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL32_ARATH (GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21
Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 2
Query:  173 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPED-LLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYI 511
            A  V GDS+VD+GNNN+L T  K NFPPYG DFEGG ATGRFSNGK  +D +A   G+  L  AYL  + + ++ + TG+N+AS GCG  P T R          Q+ +F+E I
Sbjct:   43 AFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGL-PLVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQIGTCLSLSVQVDMFQETI 155          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-20
Identity = 59/145 (40.69%), Postives = 78/145 (53.79%), Query Frame = 2
Query:  122 FCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRI 556
            FC  +    L       A +VFGDS+VD GNN+ L T A+ +  PYG DF     TGRFSNG    D+++E LG +E  + YL P LK + LL G NFAS G G    T            QL+ F++Y  ++  +VGEE  NR+
Sbjct:   13 FCILQVTSLLVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLG-QESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKVRVSGLVGEEEMNRL 156          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-20
Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  101 SVSVLDLFCRTEAVIKLPGNVTVS--AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            ++S +  F     V  + G + V   A  VFGDS+VD+GNNN L T A+ + PPYG DF     TGRFSNG    D+++E +G +E  L YL P L+   LL G NFAS G G    T            QL  F++Y  ++  ++G+    R+  ++
Sbjct:    2 TISTVIAFMSMFLVFVMSGPIVVEGRAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMYQQLDYFQQYQQRVSRLIGKPQTQRLVSQA 159          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20
Identity = 61/160 (38.12%), Postives = 82/160 (51.25%), Query Frame = 2
Query:   86 FLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFER 565
            F +L  VS    FC+++  +       V A+I+FGDSIVD GNNNNL +  K NF PYGRDF     TGRF NGK+  D  AE LG      A+L      E++L G NFAS   GY   T+           QL  ++ Y +++  ++G      +F R
Sbjct:    9 FRVLLLVSCF--FCKSKGAV-------VPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATS-VPFGSISLTRQLSYYRAYQNRVTRMIGRGNARILFSR 158          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.828e-20
Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  173 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            A  VFGDS+VD+GNNN L T A+ + PPYG D+  G  TGRFSNG    DI++E++G  E +L  L P L  E LL G NFAS G G    T            Q +LF+EY +++  I+G +
Sbjct:   31 AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIG-SEPTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLNILRIGRQFELFQEYQERVSEIIGSD 152          
The following BLAST results are available for this feature:
BLAST of CX286961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
EXL5_ARATH1.482e-2339.56GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana ... [more]
GDL42_ARATH1.936e-2339.74GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL39_ARATH2.528e-2337.50GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL41_ARATH4.768e-2240.14GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL23_ARATH2.366e-2136.31GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL32_ARATH6.885e-2149.12GDSL esterase/lipase At2g03980 OS=Arabidopsis thal... [more]
GDL79_ARATH1.174e-2040.69GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL77_ARATH1.174e-2036.71GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL59_ARATH1.534e-2038.13GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL67_ARATH5.828e-2044.72GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01003A07SK Veg1 Citrus clementina cDNA clone C01003A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286961 ID=CX286961; Name=CX286961; organism=Citrus clementina; type=EST; length=608bp
TAAGGACATATTTCTGAACTCTTCATATATTTTCCATGCGATGCAGTTTC
TGCCAATGAAGCTGTCTTTTTCTGATGCCTCCATTTTTTTAATTTTGTTT
TCTGTTTCTGTTTTGGATCTTTTTTGCAGAACAGAAGCAGTTATTAAGCT
ACCGGGCAATGTTACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCG
TTGATACAGGCAATAACAATAATCTGAAAACGCCGGCTAAATGTAATTTT
CCTCCTTATGGGAGAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTC
TAATGGAAAGGTCCCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAG
AGCTTTCGCTAGCATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTC
ACAGGTGTAAACTTTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCAC
AAGACTTTCGGCAGCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCA
AGGAATATATAGACAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAAC
AGAATCTTTGAAAGAAGTTTTTTTTGGTGGTAGTAGGAAGCAATGACATA
AACAACAA
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