CX286961

Overview
NameCX286961
Unique NameCX286961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14 contig Ccv1_Contig14:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL33_ARATH (GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20
Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  173 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLL-TGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDK 517
            A  V GDS+VD GNNN+L T  + N+PPYG DFEGG ATGRFSNGK  +D +A    +  L  AYL  +   +D + TG+N+AS GCG   LT +          Q+ LF+E I+K
Sbjct:   43 AFYVIGDSLVDPGNNNHLPTMIRANYPPYGSDFEGGKATGRFSNGKTIADYIAIYYKL-PLVPAYLGLSDDRKDTISTGMNYASAGCGIRRLTGKIAGKCLSLSKQVDLFEETIEK 157          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.696e-19
Identity = 65/175 (37.14%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   71 SDASIFLILFSVSVLDLFCRTEAVIKLPGNVT----VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFE--GGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG-EEGKNRIFERSFF 574
            S A  FL++F +  L L    EA  +   N      + A  +FGDS+VD GNNN L T ++ N  P G DF+  GG  TGRF+NG+   DI+ EELG    ++ +L P  K + LL GVN+ASGG G    T R          Q+  F     +   ++G E+ K+ I ++S F
Sbjct:   12 SPAFTFLVIFFL--LSLTASVEAAGRGVNNDKKGGGLGASFIFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIF 184          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.778e-19
Identity = 55/143 (38.46%), Postives = 74/143 (51.75%), Query Frame = 2
Query:  146 KLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            +L     V++++VFGDS VD GNNN +KT  K NFPPYG +F     TGR  +G +  D +AE +G   +  A+LDP+L   DL  G +FAS G GYD LT            Q   F  Y   L  +VG     ++   + F
Sbjct:   31 QLAAKHNVTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYPPIP-AFLDPSLTQADLTRGASFASAGSGYDDLTAN-ISNVWSFTTQANYFLHYKIHLTKLVGPLESAKMINNAIF 171          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.892e-19
Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   95 LFSVSVLDLF---CRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEG--GAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE-GKNRIFERSFF 574
            +F V VL LF    R   V        ++A  VFGDS+VD GNNN L+T ++ N PP G DF+   G  TGRF+NG+  +DI+ E+LG +  ++ YL P    E LL GVN+ASGG G    T            Q+  F     +   ++G++  ++ I +RS F
Sbjct:    5 IFFVPVLVLFFFGSRFSRVASAGDQRALAASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLF 170          

HSP 2 Score: 20.7866 bits (42), Expect = 3.892e-19
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  562 KKFFLVVVGSNDINN 606
            +  F VV+GSND  N
Sbjct:  167 RSLFSVVIGSNDFLN 181          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.416e-19
Identity = 61/168 (36.31%), Postives = 86/168 (51.19%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVI---KLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            S+ + L  + VL +   +E  +   K+P N       VFGDS+VD GNNN L T +K N+ P G DF  G+ TGRF+NG+   DI+ + LG  EL+  YL PT     +L GVN+ASGG G    T +          QL  F      + + +GE    ++F  + F
Sbjct:    2 SLLVFLCQIIVLSVLFFSEVCLAGKKIPAN------FVFGDSLVDAGNNNYLATLSKANYVPNGIDF--GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIF 161          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.177e-18
Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  110 VLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            VL L C   +V+K      V    VFGDS+VD GNNN L + A+ N+ PYG DF  G  TGRFSNGK   D++AE LG      AY   T+    +L+GVN+AS   G    T R          Q++ ++  + ++  ++G+E
Sbjct:   11 VLVLLCFGFSVVKAQAQAQVPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF--GGPTGRFSNGKTTVDVIAELLGFNGYIPAY--NTVSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQVRNYQTTVSQVVQLLGDE 150          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.382e-18
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2
Query:  182 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDF--EGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFF 574
            +FGDS+VD GNNN + T +K +  PYG DF    G  TGRF+NG+  SDI+ E LG K     YL+P  +   +  G+N+ASG  G    T           +Q+  F++  + +  ++GE G   + + + F
Sbjct:   28 IFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMF 160          

HSP 2 Score: 21.557 bits (44), Expect = 5.382e-18
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 1
Query:  547 KQNL*KKFFLVVVGSNDINN 606
            K+ L    F + +GSNDI N
Sbjct:  152 KEMLKNAMFTITIGSNDILN 171          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  149 LPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            L   V   A  VFGDS+VD GNN+ L T A+ +  PYG D+     TGRFSNG    DI++E +G+   +L YL P L  E+LL G NFAS G G    T            Q++ F++Y  ++ A++G E   ++  ++
Sbjct:   21 LAPQVKSRAFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPS-TLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQA 159          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 2
Query:  152 PGNVTVSAVIVFGDSIVDTGNNNNLK-TPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNR 553
            P + +     +FGDS+ + GNNN L+ + A+ +FP YG DF GG ATGRF+NG+   DI++ +LG+      YL  +   +  L+G+N+ASGG G    T           DQ+  FK+  + +RA +G+   N+
Sbjct:   20 PASTSSLVTYIFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILS-PPPYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIGDGAANK 153          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17
Identity = 52/112 (46.43%), Postives = 63/112 (56.25%), Query Frame = 2
Query:  182 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDK 517
            VFGDS+ D GNNNNLK+ AK NF PYG DF  G  TGRFSNG+   DI+ E  G K+    + + +  PE   TG+N+ASGG G    T+           QLQ  K  I K
Sbjct:   29 VFGDSMSDNGNNNNLKSEAKVNFSPYGNDFPKG-PTGRFSNGRTIPDIIGELSGFKDFIPPFAEAS--PEQAHTGMNYASGGSGLREETSEHLGDRISIRKQLQNHKTSITK 137          
The following BLAST results are available for this feature:
BLAST of CX286961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
GDL33_ARATH9.941e-2047.41GDSL esterase/lipase At2g04020 OS=Arabidopsis thal... [more]
GDL38_ARATH1.696e-1937.14GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL85_ARATH3.778e-1938.46GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
GDL58_ARATH3.892e-1937.35GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL64_ARATH8.416e-1936.31GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL15_ARATH4.177e-1838.19GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GDL81_ARATH5.382e-1835.34GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
LTL1_ARATH2.073e-1737.86GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL80_ARATH2.073e-1736.30GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL35_ARATH2.073e-1746.43GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01003A07SK Veg1 Citrus clementina cDNA clone C01003A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286961 ID=CX286961; Name=CX286961; organism=Citrus clementina; type=EST; length=608bp
TAAGGACATATTTCTGAACTCTTCATATATTTTCCATGCGATGCAGTTTC
TGCCAATGAAGCTGTCTTTTTCTGATGCCTCCATTTTTTTAATTTTGTTT
TCTGTTTCTGTTTTGGATCTTTTTTGCAGAACAGAAGCAGTTATTAAGCT
ACCGGGCAATGTTACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCG
TTGATACAGGCAATAACAATAATCTGAAAACGCCGGCTAAATGTAATTTT
CCTCCTTATGGGAGAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTC
TAATGGAAAGGTCCCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAG
AGCTTTCGCTAGCATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTC
ACAGGTGTAAACTTTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCAC
AAGACTTTCGGCAGCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCA
AGGAATATATAGACAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAAC
AGAATCTTTGAAAGAAGTTTTTTTTGGTGGTAGTAGGAAGCAATGACATA
AACAACAA
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