CX286961

Overview
NameCX286961
Unique NameCX286961
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14 contig Ccv1_Contig14:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16
Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  173 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERS 568
            A+ VFGDS+VD GNNN+L + A+ N+ PYG DF G   TGRFSNGK   D + E LG+ E+  A++D      D+L GVN+AS   G    T R          Q++ F++ + ++   + +E       +S
Sbjct:   49 AMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPEIP-AFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKS 179          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.668e-16
Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  146 KLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEE 541
            K+     V    +FGDS+VD GNNN L++ A+ ++ PYG DF  G  TGRFSNG+   D+L E LG      AY   T+  +++L GVN+AS   G    T            Q++ +K  + ++  I+G+E
Sbjct:   23 KVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYFPYGIDF--GGPTGRFSNGRTTVDVLTELLGFDNYIPAY--STVSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDE 150          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 2
Query:  182 VFGDSIVDTGNNNNL-KTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLL-TGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFE 562
            +FGDS+ D GNN NL ++ A  N P YG DF  G   GRF+NG+  SDI+ +++G+    +A+LDP++  + +L  GVN+ASGG G    T            Q++LF+   D + A +G++  ++ F+
Sbjct:   26 IFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPR-PVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQ 153          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL65_ARATH (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.137e-15
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 2
Query:  155 GNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGK 547
            G+       +FGDS+VD+GNNN L + A+ N+ PYG DF+ G  TGRFSNGK   D++ E LG  +    Y +   + ED+L GVN+AS   G    T R          Q+      + ++  I+G+E +
Sbjct:   22 GDPIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGIDFQYG-PTGRFSNGKTTVDVITELLGFDDYITPYSE--ARGEDILRGVNYASAAAGIREETGRQLGARITFAGQVANHVNTVSQVVNILGDENE 149          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 60/160 (37.50%), Postives = 78/160 (48.75%), Query Frame = 2
Query:   80 SIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDP--TLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNR 553
            +IF  L  V     F  TEA +       V    VFGDS+ D GNNN L T AK N+ PYG DF  G  TGRFSNG+   DI+AE +   +    Y+ P     PE    G+N+ASGG G    T++          Q++  +  I  + A V EE  N+
Sbjct:    4 AIFKALLLVIATTAFATTEAAL----GQRVPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDFARG-PTGRFSNGRNIPDIIAELMRFSD----YIPPFTGASPEQAHIGINYASGGGGIREETSQHLGEIISFKKQIKNHRSMI--MTAKVPEEKLNK 152          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   77 ASIFLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNN--NLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKP---EDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG-EEGKNRI 556
            +S    + S ++L L  ++ A I   G+  V+A+ +FGDS +D GNNN  N  T  + NFPPYG+ F  G  TGRFS+G++ SD +AE       +L  + P L+P   +  L GVNFAS G G   L             QL  +K+     R   G EE K RI
Sbjct:   16 SSFIFFIVSSTILFLAGKSSAKISHNGDNNVTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTF-FGLPTGRFSDGRLISDFIAE-----YANLPLIPPFLEPGNSQKKLYGVNFASAGAG--ALVETFQGSVINLRTQLDHYKKVERLWRTNFGKEESKKRI 173          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  167 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCG 433
            + A  VFGDS+V+ GNNN L T AK N  P G DF  G+ TGRF+NG+   DI+ + LG  EL+  YL PT +   +L G N+A GG G
Sbjct:   28 IPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF--GSPTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSG 114          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  155 GNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG 535
            G+  V A+ VFGDS++D GNNNN+ + AK N+ PYG DF GG  TGRF NG    D +A+ LG+  L  AY + T   + +L GVN+AS   G  P T            Q+  F+  +D++ +  G
Sbjct:   49 GDGIVPALFVFGDSLIDNGNNNNIPSFAKANYFPYGIDFNGG-PTGRFCNGLTMVDGIAQLLGL-PLIPAYSEAT--GDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSG 171          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 2
Query:   86 FLILFSVSVLDLFCRTEAVIKLPGNVTVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDP--TLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDK-LRAIVGEEGK-NRIFERSFFW 577
            F++L S++++ LF     V +      V  + +FGDS+VD GNNN L + A+ N+ PYG DF  G  TGRF+NG+   D LA+ LG +     Y+ P   ++ + +L G NFASG  G    T            Q++L+   + + LR   G+  +  R   R  F+
Sbjct:    6 FVLLISLNLV-LFGFKTTVSQPQQQAQVPCLFIFGDSLVDNGNNNRLLSLARANYRPYGIDFPQG-TTGRFTNGRTYVDALAQILGFRN----YIPPYSRIRGQAILRGANFASGAAGIRDETGDNLGAHTSMNQQVELYTTAVQQMLRYFRGDTNELQRYLSRCIFY 167          
BLAST of CX286961 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  182 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGK 547
            +FGDS+VD GNNN L++ A+ N+ PYG DF  G  TGRFSNG    D++A+ LG ++    Y   + + +D+L GVN+AS   G    T R          Q+      + ++  I+G++ +
Sbjct:   32 IFGDSLVDNGNNNQLQSLARANYFPYGIDFAAG-PTGRFSNGLTTVDVIAQLLGFEDYITPY--ASARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNE 150          
The following BLAST results are available for this feature:
BLAST of CX286961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
GDL75_ARATH1.029e-1637.88GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL14_ARATH6.668e-1636.36GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL31_ARATH8.709e-1637.21GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL65_ARATH1.137e-1536.64GDSL esterase/lipase At4g18970 OS=Arabidopsis thal... [more]
GDL36_ARATH3.309e-1537.50GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GLIP5_ARATH7.373e-1537.35GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL63_ARATH7.373e-1549.44GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GDL29_ARATH7.373e-1540.16GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL17_ARATH1.258e-1433.33GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
GDL82_ARATH2.145e-1436.07GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01003A07SK Veg1 Citrus clementina cDNA clone C01003A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286961 ID=CX286961; Name=CX286961; organism=Citrus clementina; type=EST; length=608bp
TAAGGACATATTTCTGAACTCTTCATATATTTTCCATGCGATGCAGTTTC
TGCCAATGAAGCTGTCTTTTTCTGATGCCTCCATTTTTTTAATTTTGTTT
TCTGTTTCTGTTTTGGATCTTTTTTGCAGAACAGAAGCAGTTATTAAGCT
ACCGGGCAATGTTACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCG
TTGATACAGGCAATAACAATAATCTGAAAACGCCGGCTAAATGTAATTTT
CCTCCTTATGGGAGAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTC
TAATGGAAAGGTCCCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAG
AGCTTTCGCTAGCATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTC
ACAGGTGTAAACTTTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCAC
AAGACTTTCGGCAGCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCA
AGGAATATATAGACAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAAC
AGAATCTTTGAAAGAAGTTTTTTTTGGTGGTAGTAGGAAGCAATGACATA
AACAACAA
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