CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_RHOP5 (30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 + TG+RK A+ARV ++ G GK I+N R+ + Y P+ I+ PLV YDV GGGLSGQA A+ G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q Sbjct: 35 YATGKRKDAVARVWIKPGAGKVIVNTREVEVYF-ARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTYFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQ 154
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PHOLL (30S ribosomal protein S9 OS=Photorhabdus luminescens subsp. laumondii GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 54/126 (42.86%), Postives = 75/126 (59.52%), Query Frame = 2 Query: 245 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 A +GTGRRK + ARV ++ G+G +IN R + Y G ++ PL + D+++ GGG+SGQA AI G+ RAL+ + RS L+K G +TRD+R VERKK GL KAR+ PQ Sbjct: 2 AENQYYGTGRRKSSSARVFIKPGSGNIVINKRSLEVYF-GRETARMVVRQPLELVDMLGKLDLYITVKGGGISGQAGAIRHGITRALMAYDETLRSDLRKAGFVTRDAREVERKKVGLRKARRRPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_COXBU (30S ribosomal protein S9 OS=Coxiella burnetii GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH------RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK + ARV L+ GTG+ IIN EY G ++ PLV L ++ +DV+ GGG SGQA AI G+ RAL++ ++ RS L+K G +TRD R+VERKK GLH AR+ Q Sbjct: 11 GTGRRKTSSARVFLRSGTGQIIINGLPLDEYF-GRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQ 135
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_COXBR (30S ribosomal protein S9 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH------RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK + ARV L+ GTG+ IIN EY G ++ PLV L ++ +DV+ GGG SGQA AI G+ RAL++ ++ RS L+K G +TRD R+VERKK GLH AR+ Q Sbjct: 11 GTGRRKTSSARVFLRSGTGQIIINGLPLDEYF-GRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQ 135
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_COXBN (30S ribosomal protein S9 OS=Coxiella burnetii (strain Dugway 5J108-111) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH------RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK + ARV L+ GTG+ IIN EY G ++ PLV L ++ +DV+ GGG SGQA AI G+ RAL++ ++ RS L+K G +TRD R+VERKK GLH AR+ Q Sbjct: 11 GTGRRKTSSARVFLRSGTGQIIINGLPLDEYF-GRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQ 135
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_COXB2 (30S ribosomal protein S9 OS=Coxiella burnetii (strain CbuG_Q212) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH------RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK + ARV L+ GTG+ IIN EY G ++ PLV L ++ +DV+ GGG SGQA AI G+ RAL++ ++ RS L+K G +TRD R+VERKK GLH AR+ Q Sbjct: 11 GTGRRKTSSARVFLRSGTGQIIINGLPLDEYF-GRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQ 135
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BRASB (30S ribosomal protein S9 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 + TG+RK A+ARV ++ G+GK +N RD + Y P+ I+ PLV YDV GGGLSGQA A+ G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q Sbjct: 37 YATGKRKDAVARVWIKPGSGKVTVNTRDIEVYF-ARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGLSKALTNFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQ 156
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BORDL (30S ribosomal protein S9 OS=Borrelia duttonii (strain Ly) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK ++ARV ++EG G IN+++ Y+Q L + PL YD+++ +GGG+SGQA AI G+ARAL + ++++ LK G LTRDSR VERKK G KARK+ Q Sbjct: 14 GTGRRKSSVARVYIREGKGDIKINHKNFDVYMQLEKLKTIALS-PLALTHTLGKYDIYINVYGGGISGQAGAIRHGIARALFDLDEEYKMVLKSNGFLTRDSRKVERKKFGKKKARKSFQ 132
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BART1 (30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 + TG+RK A+ARV ++ G+GK IIN ++ +Y P+ ++ P+V +T +D+ GGGLSGQA AI G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q Sbjct: 38 YATGKRKDAVARVWIKPGSGKIIINNKEFDKYF-ARPVLRMILRQPIVATNRDTQFDIVATVAGGGLSGQAGAIRHGISKALTYYEPELRPILKKGGFLTRDSRVVERKKYGKAKARRSFQ 157
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_TOLAT (30S ribosomal protein S9 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rpsI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21 Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A ARV + G+G +IN R ++Y P + L + D+++ GGG++GQA AI G+ RAL++ + R L+K G +TRD+R VERKK GLHKARK PQ Sbjct: 7 YGTGRRKSATARVFAKVGSGDIVINKRSLQDYFS-RPTARMVVMQALELVDMTGKLDLYITVAGGGITGQAGAIRHGITRALMQYDESLRPTLRKAGFVTRDARRVERKKVGLHKARKRPQ 126 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |