CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BORPD (30S ribosomal protein S9 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rpsI PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20 Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV +++G+GK I+N + E+ ++ PL G+ S+D+ V HGGG +GQA A+ G+ RAL+ D + L + G +TRD+R VERKK G KAR+ Q Sbjct: 7 YGTGRRKTSVARVFIKKGSGKIIVNGKPVDEFF-ARETGRMIVRQPLELTGHLESFDIKVNVHGGGETGQAGAVRHGITRALIDYDADLKPALSQAGFVTRDAREVERKKVGFRKARRRKQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_THIDA (30S ribosomal protein S9 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV ++ G+GK ++N + EY ++ PLV +D+ V GGG SGQA A+ G+ RAL+ + + LK GL+TRD+R VERKK G HKAR+ Q Sbjct: 7 YGTGRRKSSVARVFIKAGSGKIVVNDKPVDEYFS-RETGRMIVRQPLVLTDNLNRFDIMVNVAGGGESGQAGAVRHGITRALIDLDAGMKPTLKAAGLVTRDAREVERKKVGFHKARRRKQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_RALME (30S ribosomal protein S9 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV ++ G G I+N + KEY L ++ PL + ++D+ V GGG +GQA A+ G+ RAL+ + L K G +TRD+R VERKK GLHKAR+ Q Sbjct: 7 YGTGRRKSAVARVFIKSGKGDIIVNGKPIKEYF-ARETSLMIVRQPLELTAHAETFDIKVNVTGGGETGQAGAVRHGITRALIDYDATLKPTLSKAGYVTRDAREVERKKVGLHKARRRKQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_NITWN (30S ribosomal protein S9 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 56/121 (46.28%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 + TG+RK A+ARV ++ G GK ++N R+ Y P+ I+ PLV YDV GGGLSGQA A+ G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q Sbjct: 35 YATGKRKDAVARVWIKPGAGKILVNAREVDVYF-ARPVLRMMIQQPLVAAARAGQYDVVCTVAGGGLSGQAGAVRHGLSKALTHFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQ 154
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_HALHL (30S ribosomal protein S9 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 245 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 A Q +GTGRRK + ARV + G G +N R EY G ++ L + +D+ GGG SGQA A+ G+ARAL + ++PL++ G +TRD+R+VERKK GLHKAR+A Q Sbjct: 2 ANQQYYGTGRRKTSAARVFMTPGNGNITVNGRPLDEYF-GRETGRMIVRQALEQVDAGDKFDIKATVSGGGSSGQAGAVRHGIARALANYDAELKAPLRRAGFITRDARMVERKKIGLHKARRATQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_FLAPJ (30S ribosomal protein S9 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 2 Query: 269 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARK 613 GRRKCA+ARV + EGTG +N + Y L + ++ P+ T+YDV V +GGG +GQA+A+ + +AR + +V + +R+ LK EGLLTRD R+VERKK G KARK Sbjct: 8 GRRKCAVARVYVSEGTGVITVNKKAFATYFPTATLQYKVLQ-PMSMTENVTNYDVKVNVYGGGSTGQAEAVRMALARVMCEVGEGNRAILKPEGLLTRDPRMVERKKFGQKKARK 121
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_CUPTR (30S ribosomal protein S9 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV ++ G G ++N + KEY L ++ PL + ++D+ V GGG +GQA A+ G+ RAL+ +S L K G +TRD+R VERKK G HKAR+ Q Sbjct: 7 YGTGRRKSAVARVFIKSGKGDIVVNGKPIKEYF-ARETSLMIVRQPLELTAHAETFDIKVNVTGGGETGQAGAVRHGITRALIDYDATLKSALSKAGYVTRDAREVERKKVGFHKARRRKQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ALKOO (30S ribosomal protein S9 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK +IARV L G G IN RD +EY + L + +++PL + +DV GGG +GQA A+ G++RAL K ++ R LK+ G LTRD+R+ ERKK GL AR++PQ Sbjct: 7 YGTGRRKQSIARVRLVPGEGNIKINNRDIEEYFKYETL-KRDVRMPLTITDTLSRFDVIATVAGGGYTGQAGALRHGISRALTKSDEELRGTLKRAGFLTRDARMKERKKYGLKAARRSPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ACTPJ (30S ribosomal protein S9 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 245 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 AA +GTGRRK + ARV ++ G G IN R Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQ Sbjct: 3 AANQNYGTGRRKSSSARVFIKPGNGNITINQRSLDVYF-GRETSRMVVRQPLELVELLDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAAGFVTRDARRVERKKVGLHKARRRPQ 127
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ACTP7 (30S ribosomal protein S9 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rpsI PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 245 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 AA +GTGRRK + ARV ++ G G IN R Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQ Sbjct: 3 AANQNYGTGRRKSSSARVFIKPGNGNITINQRSLDVYF-GRETSRMVVRQPLELVELLDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAAGFVTRDARRVERKKVGLHKARRRPQ 127 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |