CX286980

Overview
NameCX286980
Unique NameCX286980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RSR1_CANAL (Ras-related protein RSR1 OS=Candida albicans GN=RSR1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.213e-21
Identity = 55/166 (33.13%), Postives = 97/166 (58.43%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYA-NDSVCKLLVGNKCDLVENKVVDTQTAKAFADELG-IPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +K++++G   VGKS + ++F    YV+SY  TI   ++ + +E+DG+   L+I DTAG  +F  +   Y +   G ++VY VT+  S   +     ++ R   +D+V  +LVGNKCDL +++V+  +     + + G +PF ETSA    NV++AF+ +  +I +K
Sbjct:    4 YKVVVLGAGGVGKSSITVQFVQGVYVESYDPTIEDSYR-KQIEVDGRACDLEILDTAGVAQFTAMRELYIKSGKGFLLVYSVTDENSLKELLALREQVLRIKDSDNVPMVLVGNKCDLEDDRVLSIEDGVKVSQDWGLVPFYETSAMYKTNVDEAFIDVVRQIMRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 50/164 (30.49%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKK 596
            +K++++GD  VGKS + ++F   ++VD Y  TI   ++ + + +D +   L I DTAGQE +  +   + R   G +++Y +T   +F  V++   +I R  + +    +LVGNKCDL +++ V T   +  A +    F E SAK  + ++ AF  +  EI++
Sbjct:   12 YKIVMVGDGGVGKSAMTIQFIQSTFVDEYDPTIEDSYRKQCL-IDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRDLAKQYNCQFFEASAKQNVRIQDAFHGLVREIRR 174          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAP1A_RAT (Ras-related protein Rap-1A OS=Rattus norvegicus GN=Rap1a PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADE-LGIPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +KL+++G   VGKS L ++F    +V+ Y  TI   ++ + VE+D +   L+I DTAG E+F  +   Y +   G  +VY +T   +FN+++    +I R  + + V  +LVGNKCDL + +VV  +  +  A +     FLE+SAK  INV + F  +  +I +K
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAP1A_MOUSE (Ras-related protein Rap-1A OS=Mus musculus GN=Rap1a PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADE-LGIPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +KL+++G   VGKS L ++F    +V+ Y  TI   ++ + VE+D +   L+I DTAG E+F  +   Y +   G  +VY +T   +FN+++    +I R  + + V  +LVGNKCDL + +VV  +  +  A +     FLE+SAK  INV + F  +  +I +K
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAP1A_HUMAN (Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1A PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADE-LGIPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +KL+++G   VGKS L ++F    +V+ Y  TI   ++ + VE+D +   L+I DTAG E+F  +   Y +   G  +VY +T   +FN+++    +I R  + + V  +LVGNKCDL + +VV  +  +  A +     FLE+SAK  INV + F  +  +I +K
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAP1A_BOVIN (Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADE-LGIPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +KL+++G   VGKS L ++F    +V+ Y  TI   ++ + VE+D +   L+I DTAG E+F  +   Y +   G  +VY +T   +FN+++    +I R  + + V  +LVGNKCDL + +VV  +  +  A +     FLE+SAK  INV + F  +  +I +K
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKD-AINVEQAFLTMAGEIKKKM 602
            +KL+++GD  VGKS L ++F    +V  Y  TI  D  ++  E+D +   L + DTAGQE F  +   Y R   G +IVY VT+  SF +V ++   I R  + +S   +LV NK DL+  + +  +  K  A +  IP++ETSAKD  +NV++AF  +   I++++
Sbjct:   14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQI 179          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAPA_DISOM (Ras-related protein O-Krev OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADEL-GIPFLETSAKDAINVEQAFLTMAGEIKKK 599
            +KL+++G   VGKS L ++F    +V+ Y  TI   ++ + VE+D +   L+I DTAG E+F  +   Y +   G  +VY +T   +FN+++    +I R  + + V  +LVGNKCDL + +VV  +  +  A +     FLE+SAK  INV + F  +  +I +K
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQPCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 3
Query:   27 RSPNRANGPSQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKK 596
            R   R  GP      PS+          KL+++G   VGKS L ++F    +V  Y  TI  D   +   +DG   +L I DTAGQE F  +   Y R  HG ++V+ + + +SFN V +   +I R  + D    +LVGNK DL   + V    A AF     + + E SAK  +NV++AF  +   ++K
Sbjct:   11 RGRPRGGGPGPGDPPPSET--------HKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRK 192          
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAS1_HYDMA (Ras-like protein RAS1 OS=Hydra magnipapillata GN=RAS1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21
Identity = 62/169 (36.69%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  108 FKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAN-DSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQ 611
            FK++++G   VGKS L ++   + +V+ Y  TI  D  I+ V +DG    L I DTAGQE +  +   Y R   G + ++ VT ++SF  +  +  +  R  + D V  +LVGNK DL   + V T+     A   GIP++ETSAK    VE+AF T+  EI     NQ
Sbjct:   10 FKMVVVGAGGVGKSALTIQLIQNHFVEDYDPTIE-DSYIKQVVVDGAICILDILDTAGQEEYSAMREHYMRTGEGFLCIFAVTSLKSFQEIDNFRTQALRVKDADKVPMVLVGNKVDL-PKRDVSTKDGNDKALSFGIPYVETSAKTKQGVEEAFFTLVREILADRRNQ 176          
The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RSR1_CANAL3.213e-2133.13Ras-related protein RSR1 OS=Candida albicans GN=RS... [more]
RAS2_RHIRA4.196e-2130.49Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2... [more]
RAP1A_RAT4.196e-2134.34Ras-related protein Rap-1A OS=Rattus norvegicus GN... [more]
RAP1A_MOUSE4.196e-2134.34Ras-related protein Rap-1A OS=Mus musculus GN=Rap1... [more]
RAP1A_HUMAN4.196e-2134.34Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1... [more]
RAP1A_BOVIN4.196e-2134.34Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A ... [more]
RASM_HUMAN5.480e-2135.93Ras-related protein M-Ras OS=Homo sapiens GN=MRAS ... [more]
RAPA_DISOM5.480e-2134.34Ras-related protein O-Krev OS=Discopyge ommata PE=... [more]
RRAS_HUMAN9.348e-2132.98Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
RAS1_HYDMA9.348e-2136.69Ras-like protein RAS1 OS=Hydra magnipapillata GN=R... [more]

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Properties
Property NameValue
Genbank descriptionC01003C03SK Veg1 Citrus clementina cDNA clone C01003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bp
CCCTTTCATTTTCTTTTTCTCTTTCTCGCTCTCCAAACAGGGCAAACGGA
CCGTCGCAAGATTCTTTACTTCCATCCAAAATCATGAGCAACGAATACGA
CTATCTGTTCAAGCTGTTGCTTATCGGAGACTCGTCCGTCGGGAAGTCCT
GCCTGCTGCTCCGATTTGCTGATGATTCTTATGTCGACAGCTACATCAGT
ACCATTGGAGTTGATTTTAAAATAAGAACTGTGGAGCTGGATGGGAAGAC
GATCAAACTGCAGATTTGGGACACTGCTGGACAGGAGCGATTCAGGACTA
TAACTAGCAGTTATTACCGAGGAGCCCATGGAATCATAATTGTCTATGAC
GTAACTGAGATGGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAGAT
TGACAGATACGCAAATGACAGTGTATGCAAGCTTCTAGTTGGGAACAAAT
GCGATTTAGTTGAGAACAAGGTTGTGGACACACAGACAGCCAAGGCATTT
GCAGATGAACTGGGGATTCCTTTCCTGGAGACGAGCGCCAAAGATGCAAT
CAATGTGGAGCAGGCTTTCTTGACCATGGCTGGCGAGATTAAGAAAAAAA
TGGGCAACCAGCCTACTGCAAACAA
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