CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.003e-52 Identity = 96/169 (56.80%), Postives = 133/169 (78.70%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 YD + K+LLIGDS VGKSCLL+RF +D + S+I+TIG+DFKI+TV+++GK +KLQ+WDTAGQERFRTIT++YYRGA GII+VYDVT+ +F N+KQW ++ +AND LLVGNK D+ + +VV + +A A ELG+PF+E+SAK+ NV + F T+A I++K+ Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDM-DTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKI 184
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.003e-52 Identity = 99/168 (58.93%), Postives = 129/168 (76.79%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKK 599 YD LFKLLLIGDS VGK+C+L RF+DD++ ++ISTI +DFKI+TVEL GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T +SF N+ +WL ID++AN+ V ++L+ NKCD+ +VV + A E I F ETSAK IN+E+AFLT+ +I +K Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRK 173
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.132e-50 Identity = 94/165 (56.97%), Postives = 130/165 (78.79%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTM 578 MS EY++LFK +L GDS VGK+ +L R DD++ +++I TIG++FKI+TV ++GK IKLQIWDTAG++RFR + +S+YRG HG+IIVYDVT+ SF NV W+ +I RYAN++V K+++GNK DLV KVVD A+ FAD L IPF E SAK +IN+E+AF+++ Sbjct: 1 MSKEYEHLFKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISL 163
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50 Identity = 94/171 (54.97%), Postives = 123/171 (71.93%), Query Frame = 3 Query: 87 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKK 599 S YD + KLLL+GDS VGKSCLLLRF +D + S+I+TIG+DFKIRT+E GK IKLQ+WDTAGQERFRTIT++YYRGA GI+++YDVT+ SF NV+ W + ++AN+ LVGNKCD N+ V + + A +L +PFLE SAK NV+ F +A I++K Sbjct: 8 SRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/184 (51.09%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +QD+ K S++ +DY+FKLL+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ + +V+ T+ + ++LG F ETSAKD INV+Q F + I KM Sbjct: 12 AQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKM 195
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/184 (51.09%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +QD+ K S++ +DY+FKLL+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ + +V+ T+ + ++LG F ETSAKD INV+Q F + I KM Sbjct: 12 AQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKM 195
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/182 (51.65%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 60 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/182 (51.65%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 60 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/182 (51.65%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 60 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/182 (51.65%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 60 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |