CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX286985_ssr668 microsatellite CX286985_ssr668:668..679. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 208.379 bits (529), Expect = 2.938e-53
Identity = 106/216 (49.07%), Postives = 145/216 (67.13%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            +L  +T+SF   NI+G GGFG VYK  L DG  VA+K+L  +     E +F+ EVE +S A H NL+ LRGFC    +RLL+Y YM NGS+   L ER      L W TR RIA G+A+GL YLH+ CDP I+HRD+K++NILLDE F + + DFGLA+LM   +THV+T + GT+G+I PEY     ++ K DV+ +G++LLEL+T +R  D+ +
Sbjct:  726 DLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGD-CGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCK 940          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.938e-53
Identity = 103/222 (46.40%), Postives = 153/222 (68.92%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD 675
            +L  AT+ F N +++G GGFG VYK +L DGS+VA+K+L    +  G+ +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+   L +R  + + L+WP R++IA+G+ARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + + S K DV+ YG++LLEL+TG++  D A   +++
Sbjct:  880 DLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHV-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNN 1100          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.545e-53
Identity = 102/214 (47.66%), Postives = 152/214 (71.03%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            EL   T++FS+ N +G GG+G+VYKG L +G ++A+KR ++    G   +F+TE+E++S   H+N+++L GFC    E++LVY Y+ NGS+   L  +  + + LDW  R +IALGS +GL+YLH+  DP IIHRDVK+ NILLDE   A V DFGL+KL+ D +  HVTT V+GT+G++ PEY  T + +EK+DV+G+G+++LEL+TG+   D
Sbjct:  626 ELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGA-FEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGK--NGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPID 836          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 6.545e-53
Identity = 98/217 (45.16%), Postives = 147/217 (67.74%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            REL+ AT+    +N++G GG+G VY+G L DG+ VAVK L   R    E +F+ EVE+I    H+NL+RL G+C+    R+LVY ++ NG++   +        PL W  R  I LG A+GL+YLH+  +PK++HRD+K++NILLD ++ A V DFGLAKL+  + ++VTT V GT G++APEY  TG  +EK+D++ +GI+++E+ITG+   D +R
Sbjct:  145 RELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQA-EKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSR 360          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.545e-53
Identity = 103/222 (46.40%), Postives = 152/222 (68.47%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD 675
            +L  AT+ F N +++G GGFG VYK +L DGS+VA+K+L    +  G+ +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+   L +R    + L+WP R++IA+G+ARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + + S K DV+ YG++LLEL+TG++  D A   +++
Sbjct:  880 DLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHV-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNN 1100          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.116e-52
Identity = 105/220 (47.73%), Postives = 147/220 (66.82%), Query Frame = 1
Query:   25 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +T SF+  NI+G GGFG VYK  L DG+ VA+KRL  + T   + +FQ EVE +S A H NL+ L G+C    ++LL+Y YM NGS+   L E+      LDW TR RIA G+A GL+YLH  C+P I+HRD+K++NILL + F A + DFGLA+L+   DTHVTT + GT+G+I PEY     ++ K DV+ +G++LLEL+TG+R  D+ +     D++
Sbjct:  739 STSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGD-TGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLI 957          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52
Identity = 102/214 (47.66%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            +L  AT+ F N +++G GGFG VYK  L DGS VA+K+L    +  G+ +F  E+E I    HRNL+ L G+C    ERLLVY +M  GS+   L +   + + L+W TR++IA+GSARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D
Sbjct:  875 DLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHV-SGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD 1087          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51
Identity = 107/220 (48.64%), Postives = 151/220 (68.64%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM----TPTERLLVYPYMANGSVASCLRER-PPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLA 657
            EL+ AT++FS KN +GRGGFG VYKG L DGS++AVK++ E    G + +F+ EVE+IS   HRNL+ LRG  M    + ++R LVY YM+NG++   L  R   +++PL WP RK I L  A+GL+YLH    P I HRD+K  NILLD +  A V DFGLAK     ++H+TT V GT G++APEY   G+ +EK+DV+ +G+++LE++ G++A DL+
Sbjct:  287 ELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQG-DAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 505          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.106e-51
Identity = 95/207 (45.89%), Postives = 147/207 (71.01%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            +  + ++I+G GGFG VYK  + DG + A+KR+ +    G +  F+ E+E++    HR L+ LRG+C +PT +LL+Y Y+  GS+   L ER      LDW +R  I +G+A+GLSYLH  C P+IIHRD+K++NILLD   EA V DFGLAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+R  D
Sbjct:  304 EMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQ---LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD 506          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51
Identity = 101/223 (45.29%), Postives = 154/223 (69.06%), Query Frame = 1
Query:   25 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQ--LPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            AT+ FS + ++G GGFG+VYK +L DGS+VA+K+L    T  G+ +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+ + L E+   +  + L+W  RK+IA+G+ARGL++LH  C P IIHRD+K++N+LLDE+FEA V DFG+A+L+   DTH++ + + GT G++ PEY  + + + K DV+ YG++LLEL++G++  D      D++++
Sbjct:  855 ATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRI-TGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLV 1076          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSKR1_ARATH2.938e-5349.07Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BRI1_SOLPE2.938e-5346.40Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y5977_ARATH6.545e-5347.66Probable leucine-rich repeat receptor-like protein... [more]
Y1154_ARATH6.545e-5345.16Probable serine/threonine-protein kinase At1g01540... [more]
BRI1_SOLLC6.545e-5346.40Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
PSKR1_DAUCA1.116e-5247.73Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRI1_ARATH7.237e-5247.66Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y1105_ARATH2.106e-5148.64Probable receptor-like protein kinase At1g11050 OS... [more]
FEI1_ARATH2.106e-5145.89LRR receptor-like serine/threonine-protein kinase ... [more]
BRL1_ARATH2.750e-5145.29Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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