CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            E+ V T++F     LG GGFG VY G + D   VAVK L E    G + QF+ EV+++    H NL+ L G+C      +L+Y YM+NG++   L     S+ PL W  R RIA  +A+GL YLH  C P +IHRD+K+ NILLD  F+A +GDFGL++      +THV+T V G+ G++ PEY  T   +EK+DVF +G++LLE+IT Q   D  R
Sbjct:  585 EVAVITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYK-QFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGEN-SRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR 797          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 90/217 (41.47%), Postives = 132/217 (60.83%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            +EL+ ATD+FS   +LG+GG G VYKG L DGS+VAVKR K       E +F  E+ ++S   HRN+++L G C+     +LVY Y+ NG +   L +       + W  R RIA+  A  L+Y+H      I HRD+K  NILLDE++ A V DFG ++ +    TH+TT V GT G++ PEY  + + + K+DV+ +G++L+ELITG++     R
Sbjct:  420 KELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKME-EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDES-DDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVR 634          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.333e-42
Identity = 91/210 (43.33%), Postives = 132/210 (62.86%), Query Frame = 1
Query:   49 NILGRGGFGKVYKGRLADGSLVAVKRL--------KEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            N++G+G  G VY+  + +G ++AVK+L         +E+T      F  EV+ +    H+N++R  G C     RLL+Y YM NGS+ S L ER  S L  DW  R RI LG+A+GL+YLH  C P I+HRD+KA NIL+  +FE  + DFGLAKL+D  D    +  V G+ G+IAPEY  + K +EK+DV+ YG+++LE++TG++  D
Sbjct:  790 NVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID 997          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.333e-42
Identity = 88/212 (41.51%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            + ++VAT++F+  N LG+GGFG+VYKG L +G+ VAVKRL +    G + +F+ EV +++   HRNL++L G+C+ P E++LVY ++ N S+   L + P  Q  LDW  R  I  G  RG+ YLH      IIHRD+KA+NILLD +    + DFG+A++     +   T  + GT G++ PEY+  G+ S K+DV+ +G+++LE+I G++
Sbjct:  358 KTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQ-EFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFD-PTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKK 567          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.333e-42
Identity = 96/235 (40.85%), Postives = 149/235 (63.40%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKG----------RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            EL+ AT +F   ++LG GGFG V+KG          R   G ++AVK+L ++   G + ++  EV  +    HR+L++L G+C+    RLLVY +M  GS+ + L  R     PL W  R ++ALG+A+GL++LH   + ++I+RD K +NILLD E+ A + DFGLAK     D +HV+T V GT G+ APEYL+TG  + K+DV+ +G++LLEL++G+RA D  R + + +++
Sbjct:   60 ELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLV 292          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42
Identity = 88/214 (41.12%), Postives = 131/214 (61.21%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLK---EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            REL+ AT++FS   +LG GG G VYKG L DG  VAVK+ K   E++      +F  EV ++S   HR++++L G C+     +LVY ++ NG++   + E       + W  R RIA+  A  LSYLH      I HRD+K+ NILLDE++ A V DFG ++ +    TH TT + GT+G++ PEY  + + +EK+DV+ +G++L ELITG +
Sbjct:  444 RELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQ----EFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDK 653          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.980e-42
Identity = 88/209 (42.11%), Postives = 130/209 (62.20%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            EL+ ATD+F+   +LG+GG G VYKG L DG +VAVKR K       E +F  EV +++   HRN+++L G C+     +LVY ++ NG +   LR+     + + W  R  IA+  A  LSYLH      I HRD+K  NILLDE+++  V DFG ++ +    TH+TT V GT G++ PEY  + K ++K+DV+ +G++L+ELITG+
Sbjct:  416 ELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVE-EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYI-MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGK 622          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.980e-42
Identity = 92/218 (42.20%), Postives = 129/218 (59.17%), Query Frame = 1
Query:    1 LVPRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            L+  ++  ATD+ + K  +GRG  G VY+  L  G + AVKRL              E++ I    HRNL++L GF +   + L++Y YM  GS+   L    P +  LDW  R  +ALG A GL+YLH  C P I+HRD+K  NIL+D + E  +GDFGLA+L+D  D+ V+TA V GT G+IAPE         ++DV+ YG++LLEL+T +RA D
Sbjct:  815 LLLNKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVD 1030          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.980e-42
Identity = 96/224 (42.86%), Postives = 138/224 (61.61%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKR----LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER----PPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 645
            EL  AT +FS +N +G G FG VY+G+L DG  VA+KR     K ++    E  F +E+  +S   H++L+RL G+C    E+LLVY YM NG++   L ++      S L   W  R +IAL +ARG+ YLH++  P IIHRD+K++NILLD  + A V DFGL+ +      D+      T   GT+G+I PEY S    ++K+DV+G G++LLEL+TG+RA
Sbjct:  488 ELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRA 711          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42
Identity = 90/215 (41.86%), Postives = 131/215 (60.93%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            R+L VATD F    I+G GGFG V+KG+L +   +AVK++      G   +F  E+E +    H+NL+ L+G+C    + LL+Y Y+ NGS+ S L   P  S   L W  R +IA G A GL YLH+  +  +IHRDVK +N+L+D +    +GDFGLA+L +      TTA+ GTIG++APE    G  S  +DVF +G++LLE++ G++  D
Sbjct:  358 RDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVR-EFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD 571          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4245_ARATH1.787e-4244.24Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH1.787e-4241.47Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
RCH2_ARATH2.333e-4243.33Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
CRK12_ARATH2.333e-4241.51Putative cysteine-rich receptor-like protein kinas... [more]
APK1A_ARATH2.333e-4240.85Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
WAKLN_ARATH3.047e-4241.12Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLD_ARATH3.980e-4242.11Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
PEPR1_ARATH3.980e-4242.20Leucine-rich repeat receptor-like protein kinase P... [more]
ACCR3_ARATH3.980e-4242.86Putative serine/threonine-protein kinase-like prot... [more]
LRKA1_ARATH5.198e-4241.86Lectin-domain containing receptor kinase A4.1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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