CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX286985_ssr668 microsatellite CX286985_ssr668:668..679. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.592e-51
Identity = 101/222 (45.50%), Postives = 153/222 (68.92%), Query Frame = 1
Query:   25 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQ-LPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            AT+ FS  +++G GGFG VYK +LADGS+VA+K+L +  T  G+ +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+ + L E+     + LDW  RK+IA+G+ARGL++LH  C P IIHRD+K++N+LLD++F A V DFG+A+L+   DTH++ + + GT G++ PEY  + + + K DV+ YG++LLEL++G++  D      D++++
Sbjct:  854 ATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQV-TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLV 1074          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.126e-51
Identity = 108/216 (50.00%), Postives = 148/216 (68.52%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 645
            E++ AT++FS  NI+GRGG+G V+KG L DG+ VA KR K   + GG+  F  EVE+I+   H NLL LRG+C   T     +R++V   ++NGS+   L     +QL   WP R+RIALG ARGL+YLH    P IIHRD+KA+NILLDE FEA V DFGLAK      TH++T V GT+G++APEY   G+ +EK+DV+ +G++LLEL++ ++A
Sbjct:  275 EIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKN-CSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLA--WPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKA 487          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 8.001e-51
Identity = 95/210 (45.24%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            R++++AT++F + N +G GGFG VYKG+L DG+++AVK+L      G   +F  E+ MIS   H NL++L G C+   + LLVY ++ N S+A  L     +QL LDWPTR++I +G ARGL+YLH+    KI+HRD+KA N+LLD++    + DFGLAKL +   TH++T + GT G++APEY   G  ++K DV+ +GI+ LE++ G+
Sbjct:  615 RQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNR-EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR 823          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.045e-50
Identity = 97/210 (46.19%), Postives = 142/210 (67.62%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            ++++ AT++F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ MIS   H NL++L G C+   E LLVY Y+ N S+A  L      +L LDW TR +I +G A+GL+YLH+    KI+HRD+KA N+LLD    A + DFGLAKL D ++TH++T + GTIG++APEY   G  ++K DV+ +G++ LE+++G+
Sbjct:  660 KQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 868          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.782e-50
Identity = 99/216 (45.83%), Postives = 147/216 (68.06%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            EL  ATD+FS  NI+G GGFG VYK  L +G+ +AVK+L  +     E +F+ EVE++S A H NL+ L+G+C+  + R+L+Y +M NGS+   L E P     LDWP R  I  G++ GL+Y+H  C+P I+HRD+K++NILLD  F+A V DFGL++L+    THVTT + GT+G+I PEY     ++ + DV+ +G+++LEL+TG+R  ++ R
Sbjct:  795 ELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMM-EKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFR 1009          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.782e-50
Identity = 93/207 (44.93%), Postives = 148/207 (71.50%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            +S + ++I+G GGFG VYK  + DG++ A+KR+ +    G +  F+ E+E++    HR L+ LRG+C +PT +LL+Y Y+  GS+   L +R      LDW +R  I +G+A+GL+YLH  C P+IIHRD+K++NILLD   EA V DFGLAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+   D
Sbjct:  302 ESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGEQ---LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTD 504          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.782e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 1
Query:   25 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            ATD FS KNI+G GGFG VYK  L     VAVK+L E +T G   +F  E+E +    H NL+ L G+C    E+LLVY YM NGS+   LR +      LDW  R +IA+G+ARGL++LH    P IIHRD+KA+NILLD +FE  V DFGLA+L+   ++HV+T + GT G+I PEY  + +++ K DV+ +G++LLEL+TG+
Sbjct:  913 ATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNR-EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGK 1116          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50
Identity = 106/209 (50.72%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            EL+ AT  F   N LG GGFG VYKG L DG +VAVK L      G + QF  E+  IS  +HRNL++L G C     R+LVY Y+ NGS+   L       L LDW TR  I LG ARGL YLH+    +I+HRDVKA+NILLD      + DFGLAKL D K TH++T V GTIG++APEY   G  +EKTDV+ +G++ LEL++G+
Sbjct:  686 ELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQG-KGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFG--DKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 891          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50
Identity = 95/209 (45.45%), Postives = 139/209 (66.51%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 636
            R+++ ATD F+  N +G GGFG V+KG LADG +VAVK+L  +   G   +F  E+  IS   H NL++L GFC+   + LL Y YM N S++S L      Q+P+DWPTR +I  G A+GL++LH+    K +HRD+KA NILLD++    + DFGLA+L + + TH++T V GTIG++APEY   G  + K DV+ +G+++LE++ G
Sbjct:  672 RQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNR-EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.971e-50
Identity = 95/210 (45.24%), Postives = 142/210 (67.62%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            ++++ AT++F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ MIS   H NL++L G C+   E LLVY Y+ N S+A  L      +L LDW TR ++ +G A+GL+YLH+    KI+HRD+KA N+LLD    A + DFGLAKL + ++TH++T + GTIG++APEY   G  ++K DV+ +G++ LE+++G+
Sbjct:  658 KQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 866          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRL3_ARATH3.592e-5145.50Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
RKF3_ARATH6.126e-5150.00Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH8.001e-5145.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.045e-5046.19Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH1.782e-5045.83Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
FEI2_ARATH1.782e-5044.93LRR receptor-like serine/threonine-protein kinase ... [more]
EXS_ARATH1.782e-5049.27Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y1561_ARATH3.040e-5050.72Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH3.040e-5045.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH3.971e-5045.24Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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