CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 8.846e-50
Identity = 108/209 (51.67%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            EL+ AT  F   N LG GGFG VYKG+L DG  VAVK L      G + QF  E+  IS   HRNL++L G C     RLLVY Y+ NGS+   L       L LDW TR  I LG ARGL YLH+    +I+HRDVKA+NILLD +    V DFGLAKL D K TH++T V GTIG++APEY   G  +EKTDV+ +G++ LEL++G+
Sbjct:  685 ELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQG-KGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGE--KTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 890          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.155e-49
Identity = 95/211 (45.02%), Postives = 144/211 (68.25%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPS-QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 639
            R+++ ATD+F     +G GGFG VYKG L++G L+AVK+L  +   G   +F  E+ MIS   H NL++L G C+   + +LVY Y+ N  ++  L  +  S +L LDW TRK+I LG A+GL++LH+    KI+HRD+KA+N+LLD++  A + DFGLAKL D  +TH++T + GTIG++APEY   G  +EK DV+ +G++ LE+++G+
Sbjct:  669 RQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNR-EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK 878          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.155e-49
Identity = 97/209 (46.41%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   25 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            AT  FSN N +G GGFG  YK  ++  ++ AVKRL   R  G + QF  E+  + M  H NL+ L G+  + TE  L+Y Y++ G++   ++ER  S+  ++W    +IAL  AR LSYLH+ C PK++HRD+K +NILLD  + A + DFGL+KL+    +HVTT V GT G++APEY  T + SEK DV+ YGI+LLELI+ +RA D
Sbjct:  257 ATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQ-QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKER--SKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALD 462          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.155e-49
Identity = 105/216 (48.61%), Postives = 142/216 (65.74%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            REL  AT +F     LG GGFG+VYKGRL + G +VAVK+L      G   +F  EV M+S+  H NL+ L G+C    +RLLVY +M  GS+   L + PP +  LDW  R +IA G+A+GL +LHD  +P +I+RD K++NILLDE F   + DFGLAKL    D +HV+T V GT G+ APEY  TG+ + K+DV+ +G++ LELITG++A D
Sbjct:   77 RELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAID 291          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.971e-49
Identity = 105/218 (48.17%), Postives = 146/218 (66.97%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--PLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            EL +ATD+F++   +G+GG+GKVYKG L  G++VA+KR +E    G E +F TE+E++S   HRNL+ L GFC    E++LVY YM NG+    LR+    +L  PLD+  R RIALGSA+G+ YLH   +P I HRD+KA+NILLD  F A V DFGL++L    D       HV+T V+GT G++ PEY  T + ++K+DV+  G++LLEL TG +
Sbjct:  617 ELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQG-EKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGT----LRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQ 829          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49
Identity = 103/227 (45.37%), Postives = 147/227 (64.76%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +EL  AT +F +   LG GGFGKV+KG +     +VA+K+L      G   +F  EV  +S+A H NL++L GFC    +RLLVY YM  GS+   L   P  + PLDW TR +IA G+ARGL YLHD   P +I+RD+K +NILL E+++  + DFGLAK+    D THV+T V GT G+ AP+Y  TG+ + K+D++ +G++LLELITG++A D  +   D +++
Sbjct:   94 QELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIR-EFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLV 319          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.489e-49
Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            EL  AT SFS+ + +GRGG+GKVYKG L  G +VAVKR  E+ +  G+ +F TE+E++S   HRNL+ L G+C    E++LVY YM NGS+   L  R   + PL    R RIALGSARG+ YLH   DP IIHRD+K +NILLD +    V DFG++KL+       +  HVTT V+GT G++ PEY  + + +EK+DV+  GI+ LE++TG R     R
Sbjct:  623 ELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRA-EQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSAR--FRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGR 840          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.277e-48
Identity = 97/224 (43.30%), Postives = 148/224 (66.07%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL-PLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAND 672
            +L  AT+ F   NI+  G  G +YKGRL DGSL+ +KRL++ +    E +F  E++ +    +RNL+ L G+C+   ERLL+Y YMANG +   L         PLDWP+R +IA+G+A+GL++LH  C+P+IIHR++ +  ILL  EFE  + DFGLA+LM+  DTH++T V    G  G++APEY  T  ++ K DV+ +G++LLEL+TGQ+A  + +++ +
Sbjct:  295 DLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQR--SEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEE 516          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.846e-48
Identity = 97/213 (45.54%), Postives = 141/213 (66.20%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            ++   T++ + K I+G G    VYK  L     +A+KRL  +  P    +F+TE+E I    HRN++ L G+ ++PT  LL Y YM NGS+   L      ++ LDW TR +IA+G+A+GL+YLH  C P+IIHRD+K++NILLDE FEA + DFG+AK +    TH +T V GTIG+I PEY  T + +EK+D++ +GI+LLEL+TG++A D
Sbjct:  640 DIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSL-KKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVD 850          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.846e-48
Identity = 100/209 (47.85%), Postives = 143/209 (68.42%), Query Frame = 1
Query:   16 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            L+ ATD FS+KN LG+GG G VYKG L +G  VAVKRL        +  F  EV +IS   H+NL++L G  +T  E LLVY Y+AN S+   L  R   Q PL+W  R +I LG+A G++YLH+  + +IIHRD+K +NILL+++F   + DFGLA+L     TH++TA+ GT+G++APEY+  GK +EK DV+ +G++++E+ITG+R
Sbjct:  316 LERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVD-HFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQ-PLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKR 522          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5614_ARATH8.846e-5051.67Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH1.155e-4945.02Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH1.155e-4946.41Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH1.155e-4948.61Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1684_ARATH1.971e-4948.17Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH3.362e-4945.37Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5374_ARATH7.489e-4947.96Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH1.277e-4843.30Probably inactive leucine-rich repeat receptor-lik... [more]
ERL1_ARATH2.846e-4845.54LRR receptor-like serine/threonine-protein kinase ... [more]
CRK3_ARATH2.846e-4847.85Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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