CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: LCK_MOUSE (Proto-oncogene tyrosine-protein kinase LCK OS=Mus musculus GN=Lck PE=1 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17
Identity = 64/211 (30.33%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            E +V  ++      LG G FG+V+ G     + VAVK LK+   +P     F  E  ++    H  L+RL    +T     ++  YM NGS+   L+   PS + L+      +A   A G++++ +      IHRD++AANIL+ +     + DFGLA+L++  +       +  I   APE ++ G  + K+DV+ +GI+L E++T  R
Sbjct:  237 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHPRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKT--PSGIKLNVNKLLDMAAQIAEGMAFIEEQ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 438          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_AEDAE (Serine/threonine-protein kinase PLK4 OS=Aedes aegypti GN=SAK PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            ILG+GGF  VY+ R L  G+ VA+K + ++  ++ G   + + EV + S   H ++L L  F    +   LV     NG +   LRE   ++   +      +      GL YLH H    I+HRD+  AN+LL ++    + DFGLA  +   D  H+T    GT  +I+PE  S        DV+G G ML   + G+  FD
Sbjct:   15 ILGKGGFASVYRARCLGSGTFVAIKMIDKKLMQSSGMANRVRQEVSIHSQLKHPSILELYTFFEDASHVYLVLELAENGELQRYLRE---TKKTFNEYEAASVLKQVVDGLLYLHSH---HILHRDMSLANLLLTKQMTVKISDFGLATQLTRPDEKHMTLC--GTPNYISPEVASRASHGLPADVWGLGCMLYTFLVGKPPFD 210          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPHA3_MOUSE (Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 SFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDD 675
            + S   ++G G FG+V  GRL   S     VA+K LK   T      F  E  ++    H N++RL G        ++V  YM NGS+ S LR+       +      R   G A G+ YL    D   +HRD+ A NIL++      V DFGL++++  D +  + T   +  I   +PE +S  K +  +DV+ YGI+L E+++ G+R +  ++++N D
Sbjct:  620 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPEMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAMSYRKFTSASDVWSYGIVLWEVMSYGERPY--SQMSNQD 832          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEE----RTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD----EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            LG G +  VY+G + +GS VA+K L  +     T     +F+ E  +     H N + L G  ++P    LV   +  G +A  +R    +     W T  ++A+  A+G+++LH  C P I+HRD+K+ANILL     +   A VGDFGL+     K+             +APE +  G+ +EK D++ Y I+L E+IT    F+
Sbjct: 1781 LGSGSYANVYRG-IWNGSEVAIKVLNFDDGHANTTEKYREFRNEAHITGELRHANTVSLMGVSLSPF--CLVTELLQYGDLAKFIRNTAET---FSWGTVLKLAIDVAKGMNFLHS-CKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGLSIKPIGKEVKGRKVWNWR--WLAPECMGDGQYTEKIDIYSYAIVLWEIITRDLPFE 1978          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSL-VAVKRLK--EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDTHVTTAV--RGTIGHIAPEYLSTG---KSSEKTDVFGYGIMLLELITGQRAFD 651
            L RG  G V   R AD  + VAVK L                E E++  A    +L + G C  P    +V  YM NGS+   L  R      + WP R RI    A G++YLH+  +P ++H D+K  NILLD EF   + DFGL+K  +M    +  + +    GTI ++ PE    G   ++S K D++ Y I++ E+++ ++ F+
Sbjct:   24 LSRGASGTVSSARHADWRVQVAVKHLHIHSPLLDSERNDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLH-RKIEYPDVPWPLRFRILHEIALGVNYLHN-MNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPENYEPGQKARASVKHDIYSYAIIIWEVLSRKQPFE 230          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLE 624
            +LG+G FG+VYKG L D + VA+K  KE+     +++F  E +++    H N+++L G C       ++   +  G   + LR+R      L      R +L  A G+ YL        IHRD+ A N L+ E     + DFG+++  D      +   +  I   APE L+ G+ S ++DV+ +GI+L E
Sbjct:  569 LLGKGNFGEVYKGTLKDKTPVAIKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLTFLRKRKDE---LKLKQLVRFSLDVAAGMLYLE---SKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 753          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 66/210 (31.43%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   37 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGE-LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT--AVRGTIGHIAPEYL--STGKSSEKTDVFGYGIMLLELITGQRAF 648
            F+    +G GGFG+VYK R       +A+K          E ++   E + + MA  R +L + G C  P    LV  YM  GS+   L   P     L W  R RI   +A G+++LH    P ++H D+K ANILLD  +   + DFGLAK      +H  +   + GTI ++ PE +   +     K DV+ + I++  ++T ++ F
Sbjct:   22 FAGWEKVGSGGFGQVYKVRHVHWKTWLAIKCSPSLHVDDRERMELLEEAKKMEMAKFRYILPVYGICQEPVG--LVMEYMETGSLEKLLASEP-----LPWDLRFRIVHETAVGMNFLHC-MSPPLLHLDLKPANILLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPF 223          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FES_FELCA (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Felis catus GN=FES PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGKSSEKTDVFGYGIMLLE 624
            +GRG FG+V+ GRL AD +LVAVK  +E   P  + +F  E +++    H N++RL G C       +V   +  G   + LR        L   T  ++   +A G+ YL   C    IHRD+ A N L+ E+    + DFG+++    ++     A  G +  +     APE L+ G+ S ++DV+ +GI+L E
Sbjct:  565 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRMKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGIYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 750          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 58/191 (30.37%), Postives = 97/191 (50.79%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLE 624
            +LG+G FG+VYKG L D + VAVK  KE+     +++F  E +++    H N+++L G C       ++   ++ G   + LR +      L      + +L +A G+ YL        IHRD+ A N L+ E     + DFG+++  D      +   +  I   APE L+ G+ S ++DV+ +GI+L E
Sbjct:  568 LLGKGNFGEVYKGTLKDKTSVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFLRRKKDE---LKLKQLVKFSLDAAAGMLYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPHA1_MOUSE (Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            ++G G FG+VY+G L     D   VA+K LK+    G    F  E  ++    H ++LRL G        +++  +M NG++ + L+ER     P        + LG A G++ L  H     +HRD+ A NIL+++     V DFGL +L+ D+  T+ T   +  I   APE ++    +  +DV+ +GI++ E+++
Sbjct:  630 VIGEGEFGEVYRGALRLPSQDCKTVAIKTLKDTSPDGYWWNFLREATIMGQFNHPHILRLEGVITKRKPIMIITEFMENGALDAFLKEREDQLAP---GQLVAMLLGIASGMNCLSGH---NYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLS 822          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LCK_MOUSE1.523e-1730.33Proto-oncogene tyrosine-protein kinase LCK OS=Mus ... [more]
PLK4_AEDAE1.989e-1732.35Serine/threonine-protein kinase PLK4 OS=Aedes aegy... [more]
EPHA3_MOUSE1.989e-1731.22Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 ... [more]
ROCO7_DICDI2.598e-1731.88Probable serine/threonine-protein kinase roco7 OS=... [more]
RIPK2_BOVIN2.598e-1732.54Receptor-interacting serine/threonine-protein kina... [more]
FER_MOUSE2.598e-1730.89Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
RIPK4_MOUSE3.393e-1731.43Receptor-interacting serine/threonine-protein kina... [more]
FES_FELCA3.393e-1731.63Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
FER_HUMAN3.393e-1730.37Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
EPHA1_MOUSE3.393e-1730.15Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 ... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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