CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y9849_DICDI (Probable serine/threonine-protein kinase DDB_G0278535 OS=Dictyostelium discoideum GN=DDB_G0278535 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 59/196 (30.10%), Postives = 102/196 (52.04%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS---EKTDVFGYGIMLLELIT 633
            LG G  GKVYKG L  G  VAVK LK   T     +F+ E +++     + ++   G C+ P +  +V  Y +  S+   +  +   +  + W    +  +    G+  LH+   P+I+HRD K+ N+L++E++E  V DFGL++     +    + +RGT  + +PE ++ G  S    K+D++  GI+  EL+T
Sbjct:  535 LGSGSSGKVYKG-LYKGKEVAVKVLKSITTQSQLEEFKKEFQIMGSIRSQFMVTFYGACIEP-KLCMVMEYCSRDSLYHVMNTK---KYDIGWDRFFQFTMQMTLGVQCLHNWT-PQIVHRDFKSLNLLVNEDWECKVSDFGLSRFNTADNLETLSKIRGTFAYCSPE-VAVGNGSLYTTKSDIYSIGIVFWELVT 723          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 66/208 (31.73%), Postives = 103/208 (49.52%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ---FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            +++ DS +    LG G FG+VY+G   + + VAVK LK      G +Q   F  E +++    H  L++L   C       ++   M+ GS+   L+    +   L  P    +A   A G++YL  H     IHRD+ A NIL+ +     V DFGLA+L+   D + T   +  I   APE     + S K+DV+ +GI++ EL+T
Sbjct:   89 EISRDSITLIRKLGAGQFGEVYQGLWNNSTPVAVKTLK-----AGTMQPAAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYLQGEAGA---LKLPQLIDMAAQVAAGMAYLELH---NYIHRDLAARNILVGDNNICKVADFGLARLIVSDDYNATEGAKFPIKWTAPEAALFNRFSIKSDVWSFGILITELVT 285          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ERBB4_RAT (Receptor tyrosine-protein kinase erbB-4 OS=Rattus norvegicus GN=Erbb4 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 65/210 (30.95%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 651
            +LG G FG VYKG  + +G  V    A+K L E   P   ++F  E  +++   H +L+RL G C++PT + LV   M +G +   + E      SQL L+W       +  A+G+ YL +    +++HRD+ A N+L+       + DFGLA+L++  +        +  I  +A E +   K + ++DV+ YG+ + EL+T G + +D
Sbjct:  723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASVDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 922          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 61/212 (28.77%), Postives = 113/212 (53.30%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 648
            ++  +     + LG+G FG VYKG+   G  VAVK  ++++    EL  F+ EV+++S   H N++   G C T + ++ +   +    +   L  +R   +  L    R ++A  +A G+++LH     +I+H D+K AN+L+D      V DFG +++ + ++     A +GT   +APE +     +EK DV+ +GI+L E++T +  +
Sbjct:  271 EILPEEIDRTDFLGQGSFGSVYKGKCR-GQEVAVKIPRKQKLSLYELTSFRHEVKIMSKIFHPNVVLFLGAC-TQSGKMQIVTELCQTDLEKLLHNDRTKKEFSLF--RRMQMAKDAALGMNWLHGIT--RIVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQ-DKAAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILTKEAPY 475          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RIPK2_HUMAN (Receptor-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=RIPK2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 69/211 (32.70%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSL-VAVKRLKEERTP---GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP-LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDTHVTTAV--RGTIGHIAPEYLSTGKSSE---KTDVFGYGIMLLELITGQRAFD 651
            L RG  G V   R AD  + VAVK L    TP           E E++  A    +L + G C  P    +V  YM NGS+   L  +  ++ P + WP R RI    A G++YLH+   P ++H D+K  NILLD EF   + DFGL+K  +M    +  + +    GTI ++ PE    G+ S    K D++ Y ++  E+++ ++ F+
Sbjct:   24 LSRGASGTVSSARHADWRVQVAVKHL-HIHTPLLDSERKDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRK--TEYPDVAWPLRFRILHEIALGVNYLHN-MTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFE 230          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PHG2_DICDI (Serine/threonine-protein kinase phg2 OS=Dictyostelium discoideum GN=phg2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 54/193 (27.98%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 630
            +G G + KVYKG+  D   VA+K ++       +++ F+ E +++S      L+   G C+  ++  +V  Y + G++   L       L  DW    +       G+ YLH   +P ++HRD+K  NIL+  ++ A + DFGL + M   +      +RGT+ + APE       + K+DV+  G+++ E I
Sbjct:  813 IGSGTYSKVYKGKYRD-KFVAIKTMRGSNMTTEQIESFKKECDILSTIQSPLLISFYGSCIEESQLSMVVEYCSKGTLHKVLNN---PLLDFDWDKWFKWMTEVVEGVRYLHS-MNPPMVHRDLKTLNILISSDWTAKLCDFGLTRTMTMTNVSTLGMLRGTMAYTAPEIYDGLLFNTKSDVYSLGVIMWEAI 1000          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 66/210 (31.43%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            +++  S + +  LG G FG V+ G     + VAVK LK    +P   L+   E +++ +  H  L++L  + + P E + +V  +M +GS+   L+++    L L  P    +A   A G++Y+ +  D   IHRD++AANIL+ E     + DFGLA+L++  + +     +  I   APE    G+ + K+DV+ +GI+L ELI+  R
Sbjct:  280 EISRSSITLQRRLGTGCFGDVWLGMWNGSTKVAVKTLKPGTMSPKASLE---EAQIMKLLRHDKLVQL--YAVVPEEPIYIVTEFMCHGSLLEFLKDQEGQDLTL--PQLVDMAAQVAEGMAYM-ERMD--YIHRDLRAANILVGERLVCKIADFGLARLIEDNEYNPRQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELISKGR 479          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FES_HUMAN (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Homo sapiens GN=FES PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGKSSEKTDVFGYGIMLLE 624
            +GRG FG+V+ GRL AD +LVAVK  +E   P  + +F  E  ++    H N++RL G C       +V   +  G   + LR        L   T  ++   +A G+ YL   C    IHRD+ A N L+ E+    + DFG+++    ++     A  G +  +     APE L+ G+ S ++DV+ +GI+L E
Sbjct:  567 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FES_FSVST (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Snyder-Theilen) GN=V-FES PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGKSSEKTDVFGYGIMLLE 624
            +GRG FG+V+ GRL AD +LVAVK  +E   P  + +F  E +++    H N++RL G C       +V   +  G   + LR        L   T  ++   +A G+ YL   C    IHRD+ A N L+ E+    + DFG+++    ++     A  G +  +     APE L+ G+ S ++DV+ +GI+L E
Sbjct:  222 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRMKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRLVPVKWTAPEALNYGRYSSESDVWSFGILLWE 407          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ERBB4_MOUSE (Receptor tyrosine-protein kinase erbB-4 OS=Mus musculus GN=Erbb4 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 65/210 (30.95%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 651
            +LG G FG VYKG  + +G  V    A+K L E   P   ++F  E  +++   H +L+RL G C++PT + LV   M +G +   + E      SQL L+W       +  A+G+ YL +    +++HRD+ A N+L+       + DFGLA+L++  +        +  I  +A E +   K + ++DV+ YG+ + EL+T G + +D
Sbjct:  723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 922          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y9849_DICDI4.431e-1730.10Probable serine/threonine-protein kinase DDB_G0278... [more]
SRK2_SPOLA4.431e-1731.73Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
ERBB4_RAT4.431e-1730.95Receptor tyrosine-protein kinase erbB-4 OS=Rattus ... [more]
SHKD_DICDI5.787e-1728.77Dual specificity protein kinase shkD OS=Dictyostel... [more]
RIPK2_HUMAN5.787e-1732.70Receptor-interacting serine/threonine-protein kina... [more]
PHG2_DICDI5.787e-1727.98Serine/threonine-protein kinase phg2 OS=Dictyostel... [more]
FGR_FSVGR5.787e-1731.43Tyrosine-protein kinase transforming protein Fgr O... [more]
FES_HUMAN5.787e-1731.63Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
FES_FSVST5.787e-1731.63Tyrosine-protein kinase transforming protein Fes O... [more]
ERBB4_MOUSE5.787e-1730.95Receptor tyrosine-protein kinase erbB-4 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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