CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 63/210 (30.00%), Postives = 106/210 (50.48%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI--GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 648
            + ++G G FG+VYKGRL         VA+K LK   +      F +E  ++    H N++RL G        +++  +M NG++ S LR+       +      R   G A G+ YL    +   +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G I     APE ++  K +  +DV+ YGI++ E+++ G+R +
Sbjct:  622 EEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPY 825          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_DROAN (Serine/threonine-protein kinase PLK4 OS=Drosophila ananassae GN=SAK PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 68/213 (31.92%), Postives = 104/213 (48.83%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + +  +++LG+GGF  VYK R L     VA+K + ++   G  L  + + EVE+ S   H ++L+L  F        LV     NG +   +    RP ++       R+ +A     GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  HVT    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EEYEVQHLLGKGGFASVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIGRPFTEAEAASILRQVVA-----GLLYLHSH---NIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHVTMC--GTPNYISPEVVSRTSHGLPADVWSVGCMLYTLLVGRPPFE 214          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FGFR3_HUMAN (Fibroblast growth factor receptor 3 OS=Homo sapiens GN=FGFR3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 69/215 (32.09%), Postives = 102/215 (47.44%), Query Frame = 1
Query:   55 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRK------------RIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            LG G FG+V         K R A    VAVK LK++ T        +E+EM+ M   H+N++ L G C       ++  Y A G++   LR R P  L   + T K              A   ARG+ YL      K IHRD+ A N+L+ E+    + DFGLA+ +   D +  TT  R  +  +APE L     + ++DV+ +G++L E+ T
Sbjct:  478 LGEGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGLDYSFDTCKPPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 689          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 69/211 (32.70%), Postives = 105/211 (49.76%), Query Frame = 1
Query:    7 PRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            P E ++       K+ LG G +G+VY+      G+ VAVK LKE+     +  F  E  ++    H NL++L G C       ++  +M++G++   LR     +  LD      +A   A G+SYL        IHRD+ A N L+ +     V DFGLA+LM   DT+   A  +  I   APE L+  K S K+DV+ +G++L E+ T
Sbjct:  361 PDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKD--FLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSA--GRETLDAVALLYMATQIASGMSYLESR---NYIHRDLAARNCLVGDNKLVKVADFGLARLM-RDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIAT 563          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 64/207 (30.92%), Postives = 104/207 (50.24%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE--RLLVYPYMANGSVASCLRERPPSQL-PLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--SEKTDVFGYGIMLLELITGQRAFDL 654
            +LGR   G +YK  L +G ++ VK L+       +  F  E + I    H N++ LR +   P E  RLL+  Y+   S+A  L E  P +  P+ +  R ++A+  A+ L YLHD   P   H ++K  NI+L      V + D+ + +LM              +G+ APE  S  K   + K+DV+ +G++L+EL+T + A D+
Sbjct:  773 VLGRSSHGTLYKATLDNGHMLTVKWLRVGLVRHKK-DFAREAKKIGSLKHPNIVPLRAYYWGPREQERLLLSDYLRGESLAMHLYETTPRRYSPMSFSQRLKVAVEVAQCLLYLHDRAMP---HGNLKPTNIILSSPDNTVRITDYCVHRLMTPSGVAEQILNMSALGYSAPELSSASKPIPTLKSDVYAFGVILMELLTRRSAGDI 975          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 63/220 (28.64%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL----KEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD--FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 648
            EL+ A + FSN  I+       VYKG L+ G  +AV        +E T   E+ ++ +++ +S   H+N + L G+C    P  R++V+ Y  NG++   L ++    L  DW  R RI +G+A  L ++H   +P + H D  ++ I L +++ A V +  F L   ++ K  HV+  +  T   + PE         + +V  +G+++LE+I+G+ +F
Sbjct:  378 ELETACEDFSN--IIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHL--DWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNPK-KHVSGDLEQTSLLLPPE--------PEANVHSFGVLMLEIISGKLSF 583          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: M3K7_RAT (Mitogen-activated protein kinase kinase kinase 7 OS=Rattus norvegicus GN=Map3k7 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP-------LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + ++GRG FG V K +      VA+K+++ E        F  E+  +S   H N+++L G C+ P    LV  Y   GS+ + L    P  LP       + W       L  ++G++YLH      +IHRD+K  N+LL      + + DFG A  +    TH+T   +G+   +APE       SEK DVF +GI+L E+IT ++ FD
Sbjct:   39 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 230          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: M3K7_PONAB (Mitogen-activated protein kinase kinase kinase 7 OS=Pongo abelii GN=MAP3K7 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP-------LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + ++GRG FG V K +      VA+K+++ E        F  E+  +S   H N+++L G C+ P    LV  Y   GS+ + L    P  LP       + W       L  ++G++YLH      +IHRD+K  N+LL      + + DFG A  +    TH+T   +G+   +APE       SEK DVF +GI+L E+IT ++ FD
Sbjct:   39 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 230          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: M3K7_MOUSE (Mitogen-activated protein kinase kinase kinase 7 OS=Mus musculus GN=Map3k7 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP-------LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + ++GRG FG V K +      VA+K+++ E        F  E+  +S   H N+++L G C+ P    LV  Y   GS+ + L    P  LP       + W       L  ++G++YLH      +IHRD+K  N+LL      + + DFG A  +    TH+T   +G+   +APE       SEK DVF +GI+L E+IT ++ FD
Sbjct:   39 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 230          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: M3K7_HUMAN (Mitogen-activated protein kinase kinase kinase 7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP-------LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + ++GRG FG V K +      VA+K+++ E        F  E+  +S   H N+++L G C+ P    LV  Y   GS+ + L    P  LP       + W       L  ++G++YLH      +IHRD+K  N+LL      + + DFG A  +    TH+T   +G+   +APE       SEK DVF +GI+L E+IT ++ FD
Sbjct:   39 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 230          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHB1_MOUSE1.684e-1630.00Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]
PLK4_DROAN2.199e-1631.92Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
FGFR3_HUMAN2.199e-1632.09Fibroblast growth factor receptor 3 OS=Homo sapien... [more]
ABL_DROME2.199e-1632.70Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
Y5020_ARATH2.872e-1630.92Probable inactive receptor kinase At5g10020 OS=Ara... [more]
MRH1_ARATH2.872e-1628.64Probable LRR receptor-like serine/threonine-protei... [more]
M3K7_RAT2.872e-1632.38Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_PONAB2.872e-1632.38Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_MOUSE2.872e-1632.38Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_HUMAN2.872e-1632.38Mitogen-activated protein kinase kinase kinase 7 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
back to top