CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +G G FG VYKG+      VAVK L        +LQ F+ EV ++    H N+L   G+   P  +L +      GS  S        +   +      IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G+I  +APE +        S ++DV+ +GI+L EL+TGQ  +  + + N D ++
Sbjct:   89 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 292          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PTK6_HUMAN (Protein-tyrosine kinase 6 OS=Homo sapiens GN=PTK6 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            LG G FG+V++G   D   VA+K +  +     ++  Q+E++ +    H+++L L           ++   MA GS+   LR+     LP+       IA   A G+ YL        IHRD+ A NIL+ E     VGDFGLA+L+  +D +++          APE LS G  S K+DV+ +GI+L E+ +
Sbjct:  197 LGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQM-LQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVS--ELLDIAWQVAEGMCYLESQ---NYIHRDLAARNILVGENTLCKVGDFGLARLIK-EDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFS 382          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_DROVI (Serine/threonine-protein kinase PLK4 OS=Drosophila virilis GN=SAK PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            D +  +++LG+GGF  VYK + L     VA+K + ++   G  L  + + EVE+ S   H ++L+L  F        L+     NG +   + ++   + P        I      GL YLH H    I+HRD+  +N+LL ++    + DFGLA  +   D  H+T    GT  +I+PE +S        D++  G ML  L+ G+  FD
Sbjct:   12 DEYEVQHLLGKGGFACVYKAKCLRSHQNVAIKMIDKKLIQGSGLSNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLILELADNGELHRYMNQQ--MKRPFTEQEAASILRQVVDGLLYLHSH---NIMHRDISMSNLLLSKDMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSHQSHGLPADLWSVGCMLYTLLVGRPPFD 215          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_DROGR (Serine/threonine-protein kinase PLK4 OS=Drosophila grimshawi GN=SAK PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            D +  +++LG+GGF  VYK + L     VA+K + ++   G  L  + + EVE+ S   H ++L+L  F        LV     NG +   + ++   + P        I      GL YLH H    I+HRD+  +N+LL  +    + DFGLA  +   D  H+T    GT  +I+PE +S        D++  G ML  L+ G+  FD
Sbjct:   12 DEYEVQHLLGKGGFACVYKAKCLRTQQNVAIKMIDKKLIQGSGLSSRVRQEVEIHSRLKHPSVLQLHTFFQDGNYVYLVLELADNGELHRYMNQQ--MKRPFTEQEASSILRQVVDGLLYLHSH---NIMHRDISLSNLLLSRDMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSHMSHGLPADLWSVGCMLYTLLVGRPPFD 215          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PKN1_MOUSE (Serine/threonine-protein kinase N1 OS=Mus musculus GN=Pkn1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 70/225 (31.11%), Postives = 104/225 (46.22%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEM----------ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 648
            R+  +  + F    +LGRG FGKV      + G L A+K LK+     G++  + EVE           ++ A H  L+ L G   TP     V  Y A G +   +     S+     P     +     GL +LH+H   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G++L E++ G+  F
Sbjct:  610 RKSPLTLEDFKFLAVLGRGHFGKVLLSEFRSSGELFAIKALKK-----GDIVARDEVESLMCEKRILAAVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSE-----PRAVFYSACVVLGLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPF 819          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FGFR3_MOUSE (Fibroblast growth factor receptor 3 OS=Mus musculus GN=Fgfr3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 70/215 (32.56%), Postives = 105/215 (48.84%), Query Frame = 1
Query:   55 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPS---------QLPLDWPTRKRI---ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            LG G FG+V         K R A    VAVK LK++ T        +E+EM+ M   H+N++ L G C       ++  Y A G++   LR R P          +LP +  T K +   A   ARG+ YL      K IHRD+ A N+L+ E+    + DFGLA+ +   D +  TT  R  +  +APE L     + ++DV+ +G++L E+ T
Sbjct:  472 LGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEYAAKGNLREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 683          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 65/217 (29.95%), Postives = 105/217 (48.39%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 648
            ++   + S   ++G G FG+V  GRL   S     VA+K LK   T      F  E  ++    H N++RL G        ++V  YM NGS+ S LR+       +      R   G A G+ YL    D   +HRD+ A NIL++      V DFGL++++  D +  + T   +  I   +PE ++  K +  +D + YGI+L E+++ G+R +
Sbjct:  615 ELDASNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKAGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDAWSYGIVLWEVMSYGERPY 825          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +G G FG VYKG+      VAVK L        +LQ F+ EV ++    H N+L   G+   P  +L +      GS  S        +   +      IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G+I  +APE +        S ++DV+ +GI+L EL+TGQ  +  + + N D ++
Sbjct:  500 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 703          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +G G FG VYKG+      VAVK L        +LQ F+ EV ++    H N+L   G+   P  +L +      GS  S        +   +      IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G+I  +APE +        S ++DV+ +GI+L EL+TGQ  +  + + N D ++
Sbjct:  463 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 666          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +G G FG VYKG+      VAVK L        +LQ F+ EV ++    H N+L   G+   P  +L +      GS  S        +   +      IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G+I  +APE +        S ++DV+ +GI+L EL+TGQ  +  + + N D ++
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 706          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RMIL_AVEVR4.899e-1632.09Serine/threonine-protein kinase-transforming prote... [more]
PTK6_HUMAN4.899e-1632.12Protein-tyrosine kinase 6 OS=Homo sapiens GN=PTK6 ... [more]
PLK4_DROVI4.899e-1629.86Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROGR4.899e-1630.33Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PKN1_MOUSE4.899e-1631.11Serine/threonine-protein kinase N1 OS=Mus musculus... [more]
FGFR3_MOUSE4.899e-1632.56Fibroblast growth factor receptor 3 OS=Mus musculu... [more]
EPHA3_CHICK4.899e-1629.95Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
BRAF1_MOUSE4.899e-1632.09B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN4.899e-1632.09B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA4.899e-1632.09B-Raf proto-oncogene serine/threonine-protein kina... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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