CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            +G G FG VYKG+      VAVK L        +LQ F+ EV ++    H N+L   G+   P  +L +      GS  S        +   +      IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G+I  +APE +        S ++DV+ +GI+L EL+TGQ  +  + + N D ++
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 706          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: NEK8_MOUSE (Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 64/214 (29.91%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQF-QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL 663
            + +    ++GRG FG V+   R AD  LV +K++  E+    E Q  Q E +++ +  H N++      +     ++   Y   G++A  +++R  S L  +  T     +     L ++H H    I+HRD+K  NILLD+    V +GDFG++K++  K    T  V GT  +I+PE       ++K+D++  G +L EL + +RAF+ A L
Sbjct:    2 EKYERIRVVGRGAFGIVHLCLRKADQKLVILKQIPVEQMTKEERQAAQNECQVLKLLNHPNVIEYYENFLEDKALMIAMEYAPGGTLAEFIQKRCNSLLEEE--TILHFFVQILLALHHVHTHL---ILHRDLKTQNILLDKHRMVVKIGDFGISKILSSKSKAYT--VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL 208          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: MATK_RAT (Megakaryocyte-associated tyrosine-protein kinase OS=Rattus norvegicus GN=Matk PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 66/197 (33.50%), Postives = 101/197 (51.27%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 645
            +G G FG V +G    G  VAVK +K + T      F  E  +++   HRNL+RL G  +      +V  +++ G++ + LR R   +  +      + AL  A G+ YL      K++HRD+ A NIL+ E+  A V DFGLAK    K      + R  +   APE L  G+ S K+DV+ +G++L E+ +  RA
Sbjct:  200 IGEGEFGAVLQGEYL-GQKVAVKNIKCDVTAQA---FLDETAVMTKLQHRNLVRLLGVILHHG-LYIVMEHVSKGNLVNFLRTR--GRALVSTSQLLQFALHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAKAELRKG---LDSSRLPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRA 383          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: MATK_MOUSE (Megakaryocyte-associated tyrosine-protein kinase OS=Mus musculus GN=Matk PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 645
            +G G FG V +G    G  VAVK +K + T      F  E  +++   HRNL+RL G  +      +V  +++ G++ + LR R   +  +      + AL  A G+ YL      K++HRD+ A NIL+ E+  A V DFGLAK     +     + R  +   APE L  G+ S K+DV+ +G++L E+ +  RA
Sbjct:  239 IGEGEFGAVLQGEYL-GQKVAVKNIKCDVTAQA---FLDETAVMTKLQHRNLVRLLGVILHHG-LYIVMEHVSKGNLVNFLRTR--GRALVSTSQLLQFALHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAK----AERKGLDSSRLPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRA 421          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: LYN_RAT (Tyrosine-protein kinase Lyn OS=Rattus norvegicus GN=Lyn PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 60/207 (28.99%), Postives = 101/207 (48.79%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            ++  +S      LG G FG+V+ G   + + VAVK LK    PG      F  E  ++    H  L+RL           ++  +MA GS+   L+    S++ L  P     +   A G++Y+        IHRD++AAN+L+ E     + DFGLA++++  +       +  I   APE ++ G  + K+DV+ +GI+L E++T
Sbjct:  241 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSAQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGSKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FGFR2_NOTVI (Fibroblast growth factor receptor 2 OS=Notophthalmus viridescens GN=FGFR2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 66/215 (30.70%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   55 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWPTRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            LG G FG+V         K R  D + VAVK LK++ T        +E+EM+ M   H+N++ L G C       ++  Y + G++   LR R P         +++P +  T K +   +   ARG+ YL      K IHRD+ A N+L+ E     + DFGLA+ ++  D +  TT  R  +  +APE L     + ++DV+ +G+++ E+ T
Sbjct:  395 LGEGCFGQVVMAEAVGIDKDRPKDAATVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRTRRPPGMEYSFDINRIPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTETNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 606          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPB1A_XENLA (Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ephb1-A PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 63/210 (30.00%), Postives = 106/210 (50.48%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI--GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 648
            + ++G G FG+VYKGRL   S     VA+K LK   +      F +E  ++    H N++RL G        +++  +M NG++ S LR+       +      R   G A G+ YL    +   +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G I     A E ++  K +  +DV+ YGI++ E+++ G+R +
Sbjct:  623 EEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAQEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 826          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_DROPS (Serine/threonine-protein kinase PLK4 OS=Drosophila pseudoobscura pseudoobscura GN=SAK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 67/214 (31.31%), Postives = 106/214 (49.53%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + +  +++LG+GGF  VYK R L     VA+K + ++   G  L  + + EVE+ S   H ++L+L  F        LV     NG +   +++   RP ++       R+ +A     GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EEYEVQHLLGKGGFASVYKARCLHSHQDVAIKMIDKKLIQGTGLTSRVRQEVEIHSRLKHPSVLQLYTFFQDVNYVYLVLELAHNGELQRYMKQHLLRPFTESEGATILRQVVA-----GLLYLHSH---NIMHRDISLSNLLLSKEMHIKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRLSHGLPADVWSVGCMLYTLLVGRPPFE 215          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PLK4_DROPE (Serine/threonine-protein kinase PLK4 OS=Drosophila persimilis GN=SAK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 67/214 (31.31%), Postives = 106/214 (49.53%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            + +  +++LG+GGF  VYK R L     VA+K + ++   G  L  + + EVE+ S   H ++L+L  F        LV     NG +   +++   RP ++       R+ +A     GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EEYEVQHLLGKGGFASVYKARCLHSHQDVAIKMIDKKLIQGTGLTSRVRQEVEIHSRLKHPSVLQLYTFFQDVNYVYLVLELAHNGELQRYMKQHLLRPFTESEGATILRQVVA-----GLLYLHSH---NIMHRDISLSNLLLSKEMHIKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRLSHGLPADVWSVGCMLYTLLVGRPPFE 215          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: PKN1_RAT (Serine/threonine-protein kinase N1 OS=Rattus norvegicus GN=Pkn1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 70/225 (31.11%), Postives = 103/225 (45.78%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEM----------ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 648
            R+  +  + F    +LGRG FGKV      + G L A+K LK+     G++  + EVE           ++ A H  L+ L G   TP     V  Y A G +   +     S+     P     +     GL +LH+H   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G+ L E++ G+  F
Sbjct:  610 RKSPLTLEDFKFLAVLGRGHFGKVLLSEFHSSGELFAIKALKK-----GDIVARDEVESLMCEKRILATVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSE-----PRAGFYSACVVLGLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVFLYEMLVGESPF 819          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_CHICK4.899e-1632.09B-Raf proto-oncogene serine/threonine-protein kina... [more]
NEK8_MOUSE6.399e-1629.91Serine/threonine-protein kinase Nek8 OS=Mus muscul... [more]
MATK_RAT6.399e-1633.50Megakaryocyte-associated tyrosine-protein kinase O... [more]
MATK_MOUSE6.399e-1632.99Megakaryocyte-associated tyrosine-protein kinase O... [more]
LYN_RAT6.399e-1628.99Tyrosine-protein kinase Lyn OS=Rattus norvegicus G... [more]
FGFR2_NOTVI6.399e-1630.70Fibroblast growth factor receptor 2 OS=Notophthalm... [more]
EPB1A_XENLA6.399e-1630.00Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ep... [more]
PLK4_DROPS8.357e-1631.31Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROPE8.357e-1631.31Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PKN1_RAT8.357e-1631.11Serine/threonine-protein kinase N1 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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