CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: NEK8_DANRE (Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 63/214 (29.44%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   31 DSFSNKNILGRGGFGKVYK-GRLADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL 663
            + +    ++GRG FG V+   R  D +LV +K +  E+ T    L  Q E +++ +  H N++      +     ++   Y   G++A  +++R  S L  D      + +  A  L ++H+     I+HRD+K  NILLD+    V +GDFG++K++  K    T  V GT  +I+PE       ++K+D++  G +L EL + +RAF+ A L
Sbjct:    2 EKYEKTKVVGRGAFGIVHLCRRRTDSALVILKEIPVEQMTRDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIAMEYAPGGTLADYIQKRCNSLLDEDTILHSFVQILLA--LYHVHNKL---ILHRDLKTQNILLDKHQMIVKIGDFGISKILVSKSKAYT--VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL 208          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: LYN_HUMAN (Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 60/207 (28.99%), Postives = 100/207 (48.31%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 633
            ++  +S      LG G FG+V+ G   + + VAVK LK    PG      F  E  ++    H  L+RL           ++  YMA GS+   L+     ++ L  P     +   A G++Y+        IHRD++AAN+L+ E     + DFGLA++++  +       +  I   APE ++ G  + K+DV+ +GI+L E++T
Sbjct:  241 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: GPRK1_DROME (G protein-coupled receptor kinase 1 OS=Drosophila melanogaster GN=Gprk1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 74/220 (33.64%), Postives = 103/220 (46.82%), Query Frame = 1
Query:   16 LQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGIMLLELITGQRAF 648
            +Q+  + FS   I+GRGGFG+VY  R AD G + A+K L ++R     GE+    E  M+  AV   +      CMT     P +   +   M  G +   L +             K  A     GL ++H  C   I++RD+K ANILLDE     + D GLA     K  H +    GT G++APE LS G S +   D F +G ML +L+ G   F
Sbjct:  184 IQLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQ-AVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGI----FSEDEMKFYAAEVILGLEHMHKRC---IVYRDLKPANILLDENGHIRISDLGLACDFSKKKPHASV---GTHGYMAPEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPF 392          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: FGR_MOUSE (Proto-oncogene tyrosine-protein kinase Fgr OS=Mus musculus GN=Fgr PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 67/211 (31.75%), Postives = 108/211 (51.18%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            ++  +S + +  LG G FG V+ G     + VAVK LK    PG      F  E +++ +  H  L++L  + +   E + +V  +M  GS+   L++R    L L  P    +A   A G++Y+        IHRD++AANIL+ E     + DFGLA+L++  + +     +  I   APE    G+ + K+DV+ +GI+L ELIT  R
Sbjct:  245 EIDRNSIALERRLGTGCFGDVWLGTWNCSTKVAVKTLK----PGTMSPKAFLEEAQIMKLLRHDKLVQL--YAVVSEEPIYIVTEFMCYGSLLDFLKDREGQNLML--PHLVDMAAQVAEGMAYMERM---NYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGR 444          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ERBB_ALV (Tyrosine-protein kinase transforming protein erbB OS=Avian leukosis virus GN=V-ERBB PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 65/216 (30.09%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   37 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 651
            F    +LG G FG VYKG  + +G  V    A+K L+E  +P    +   E  +++   + ++ RL G C+T T +L+    M  G +   +RE      SQ  L+W       +  A+G++YL +    +++HRD+ A N+L+       + DFGLAKL+  D K+ H     +  I  +A E +     + ++DV+ YG+ + EL+T G + +D
Sbjct:  132 FKKVKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ-LMPYGCLLDYIREHKDNIGSQYLLNW------CVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 336          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: ERBB2_MESAU (Receptor tyrosine-protein kinase erbB-2 OS=Mesocricetus auratus GN=ERBB2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 68/210 (32.38%), Postives = 109/210 (51.90%), Query Frame = 1
Query:   52 ILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 651
            +LG G FG VYKG  + DG  V    A+K L+E  +P    +   E  +++      + RL G C+T T +L V   M  G +   +RE   R  SQ  L+W       +  A+G+SYL D    +++HRD+ A N+L+       + DFGLA+L+D  +T +     +  I  IA E +   + + ++DV+ YG+ + EL+T G + +D
Sbjct:  725 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGLGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVREHRGRLGSQDLLNW------CVQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWIALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 924          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   46 KNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 648
            + ++G G FG+V  G L         VA+K LK   T      F +E  ++    H N++ L G     +  +++  +M NGS+ S LR+       +      R   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ +  D  D   T+A+ G   I   APE +   K +  +DV+ YGI++ E+++ G+R +
Sbjct:  642 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 845          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 61/206 (29.61%), Postives = 103/206 (50.00%), Query Frame = 1
Query:   52 ILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-------HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQR 642
            ++G+G FG VY    +  G ++AVK+++  +         + VE +   V       H N+++  GF        L   Y+A GSV S +R         D P  K +     +GL+YLH      I+HRD+KA N+LLD++    + DFG+++      ++    +RGT+  +APE + T +  S K D++  G ++LE+  G+R
Sbjct: 1180 MIGKGSFGAVYLCLNVTTGEMMAVKQVEVPKYSSQNEAILSTVEALRSEVSTLKDLDHLNIVQYLGFENKNNIYSLFLEYVAGGSVGSLIRMYGR----FDEPLIKHLTTQVLKGLAYLHSK---GILHRDMKADNLLLDQDGICKISDFGISRKSKDIYSNSDMTMRGTVFWMAPEMVDTKQGYSAKVDIWSLGCIVLEMFAGKR 1378          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: VAB1_CAEEL (Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 60/206 (29.13%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   55 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD--HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 648
            +GRGG G  Y+    +   VA+K LK   +   + +F TE  ++    H N++RL G   +    ++V  YMANGS+   LR        + W     +  G A G+ YL D  +       RD+ A N+LLD E    + DFGL++ +  + + V        G I     APE ++  K +  +DV+ +G+++ E+ + G+R +
Sbjct:  728 MGRGGGGGGYESEPYE--TVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRLIGVVTSAEPVMIVAEYMANGSLDQFLRNTDQRGEKVHWEKITEMLYGIASGMKYLTDMGYVHRVSFLRDLAARNVLLDMELRCKIADFGLSRGVRSEGSSVEPEYTTNGGKIPVRWTAPEAITHRKFTPSSDVWSFGVVIWEVCSFGERPY 931          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 64/210 (30.48%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   19 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            ++  +S      LG G FG+V+ G   + + VAVK LK    PG      F  E  ++    H++L++L   C       +V  YM+ GS+   L +     L L  PT   +A   A G+++L        IHRD+ A NIL+ E +   V DFGLA+L++  +       +  I   APE     + + K+DV+ +GI++ E++T  R
Sbjct:  234 EIPRESLRLNRKLGAGQFGEVWAGVWNNTTQVAVKTLK----PGTMSPASFLDEAGVMKKLRHKHLVQLYAICSDREPIYIVTEYMSGGSLLDYLSKGEGVNLQL--PTLIDMAAQVASGMAFLEAQ---GYIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVTKGR 434          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NEK8_DANRE8.357e-1629.44Serine/threonine-protein kinase Nek8 OS=Danio reri... [more]
LYN_HUMAN8.357e-1628.99Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN... [more]
GPRK1_DROME8.357e-1633.64G protein-coupled receptor kinase 1 OS=Drosophila ... [more]
FGR_MOUSE8.357e-1631.75Proto-oncogene tyrosine-protein kinase Fgr OS=Mus ... [more]
ERBB_ALV8.357e-1630.09Tyrosine-protein kinase transforming protein erbB ... [more]
ERBB2_MESAU8.357e-1632.38Receptor tyrosine-protein kinase erbB-2 OS=Mesocri... [more]
EPHB2_CHICK8.357e-1630.00Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
BCK1_YEAST8.357e-1629.61Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
VAB1_CAEEL1.091e-1529.13Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab... [more]
STK_HYDAT1.091e-1530.48Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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