CX286985

Overview
NameCX286985
Unique NameCX286985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX286985_ssr668 microsatellite CX286985_ssr668:668..679. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43
Identity = 93/228 (40.79%), Postives = 138/228 (60.53%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSL--VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 684
            ++L  ATD F    I+G GGFG V++G L+  S   +AVK++      G   +F  E+E +    H+NL+ L+G+C    + LL+Y Y+ NGS+ S L  RP  S + L W  R +IA G A GL YLH+  +  +IHRD+K +N+L++++    +GDFGLA+L +      TT V GTIG++APE    GKSS  +DVF +G++LLE+++G+R  D       D VM
Sbjct:  352 KDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVR-EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVM 578          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.140e-43
Identity = 93/213 (43.66%), Postives = 141/213 (66.20%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            + ++ AT +FS  N LG GGFG+VYKG L +G+ +AVKRL   +T G GE++F+ EV +++   H NL+RL GF +   E+LLVY ++ N S+   L + P  +  LDW  R+ I  G  RG+ YLH     KIIHRD+KA+NILLD +    + DFG+A++     T   TA V GT G+++PEY++ G+ S K+DV+ +G+++LE+I+G++
Sbjct:  350 KTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLS--KTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFD-PNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK 559          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.020e-43
Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            + ++ AT++FS +  LG GG G V+KGRL DG  +AVKRL E +T   + +F+ EV +++   HRNL+RL GF +   E+++VY Y+ N S+   L + P  Q  LDW  R +I  G+ARG+ YLH    P IIHRD+KA NILLD      V DFG A++  MD +   +T    GT G++APEY+  G+ S K+DV+ YG+++LE+I G+R
Sbjct:  351 KTIETATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSE-KTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFD-PTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMD-QSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKR 558          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 95/210 (45.24%), Postives = 134/210 (63.81%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADG-SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 630
            E++ AT+ F +K I+G GGFG VYKG++  G +LVAVKRL+     G + +F+TE+EM+S   H +L+ L G+C    E +LVY YM +G++   L R    S  PL W  R  I +G+ARGL YLH      IIHRD+K  NILLDE F   V DFGL+++       THV+T V+GT G++ PEY      +EK+DV+ +G++LLE++
Sbjct:  510 EIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAK-EFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 90/217 (41.47%), Postives = 132/217 (60.83%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            REL+ AT++FS   ILG GG G VYKG L DG +VAVK+ K       E +F  EV ++S   HRN+++L G C+     +LVY ++ NG++   L +         W  R RIA+  A  LSYLH      I HRD+K+ NI+LDE+  A V DFG ++ +    TH+TT V GT+G++ PEY  + + ++K+DV+ +G++L ELITG+++    R
Sbjct:  424 RELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLE-EFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLR 639          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 91/216 (42.13%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            +L+ ATD F+   ILG+GG G VYKG L DG +VAVK+ K  +    E +F  E+ ++S   HRN++++ G C+     +LVY ++ N ++   L   P    P+ W  R  IA   A  LSYLH      I HRDVK+ NILLDE+  A V DFG+++ +   DTH+TT V+GTIG++ PEYL +   + K+DV+ +G++L+EL+TG++   L R
Sbjct:  382 DLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLE-EFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHN-PSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLR 595          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 89/212 (41.98%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   10 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 642
            + ++ AT+ FS  N LG GGFG VYKG+L++G+ VAVKRL + ++  G  +F+ E  +++   HRNL+RL GFC+   E++L+Y ++ N S+   L + P  Q  LDW  R +I  G ARG+ YLH     KIIHRD+KA+NILLD +    + DFGLA +   + T   T  + GT  +++PEY   G+ S K+D++ +G+++LE+I+G++
Sbjct:  341 KTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSK-KSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFD-PEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKK 550          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 94/227 (41.41%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLAD----------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 660
            EL+ AT +F   ++LG GGFG V+KG + +          G ++AVK+L ++   G + ++  EV  +    H NL++L G+C+    RLLVY +M  GS+ + L  R     PL W  R ++ALG+A+GL++LH + +  +I+RD K +NILLD E+ A + DFGLAK     D +HV+T + GT G+ APEYL+TG  + K+DV+ YG++LLE+++G+RA D  R
Sbjct:   61 ELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNR 285          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.368e-42
Identity = 96/224 (42.86%), Postives = 135/224 (60.27%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEE---RTPGGEL---------QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 645
            E+   T++F+   ++G+GGFG VY G L DG+ +AVK + +    ++ G            +FQ E E++    HRNL    G+C       L+Y YMANG++   L       L   W  R  IA+ SA+GL YLH  C P I+HRDVK ANILL++  EA + DFGL+K+    D +HV TAV GT G++ PEY +T K +EK+DV+ +GI+LLELITG+R+
Sbjct:  561 EVSSITNNFNK--VIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDL--SWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRS 780          
BLAST of CX286985 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.368e-42
Identity = 93/213 (43.66%), Postives = 132/213 (61.97%), Query Frame = 1
Query:   13 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 651
            ELQ  T +F    I+G GGFG VY G + DG+ VA+KR    ++  G  +F TE++M+S   HR+L+ L G+C    E +LVY YM+NG     L  +  S  PL W  R  I +G+ARGL YLH      IIHRDVK+ NILLDE   A V DFGL+K + +   HV+TAV+G+ G++ PEY    + ++K+DV+ +G++LLE +  + A +
Sbjct:  517 ELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKR-GNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLS--PLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAIN 726          
The following BLAST results are available for this feature:
BLAST of CX286985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LRKA2_ARATH4.702e-4340.79Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK17_ARATH6.140e-4343.66Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK13_ARATH8.020e-4344.60Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5900_ARATH1.047e-4245.24Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLJ_ARATH1.047e-4241.47Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLG_ARATH1.047e-4242.13Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRK11_ARATH1.047e-4241.98Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
APK1B_ARATH1.047e-4241.41Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y4291_ARATH1.368e-4242.86Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH1.368e-4243.66Probable receptor-like protein kinase At2g21480 OS... [more]

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Properties
Property NameValue
Genbank descriptionC01003C10SK Veg1 Citrus clementina cDNA clone C01003C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286985 ID=CX286985; Name=CX286985; organism=Citrus clementina; type=EST; length=685bp
CTCGTGCCGCGAGAATTACAAGTTGCAACAGATAGTTTTAGCAATAAAAA
CATTCTGGGTAGAGGTGGGTTCGGTAAGGTCTACAAAGGACGCCTGGCAG
ATGGTTCACTGGTAGCTGTAAAAAGATTGAAAGAAGAGCGTACTCCTGGT
GGGGAGCTGCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTACA
TCGTAATCTCCTTCGCTTGCGTGGCTTCTGTATGACACCAACTGAAAGGC
TGCTTGTTTATCCCTATATGGCAAATGGAAGTGTCGCATCTTGTTTAAGA
GAACGTCCCCCATCACAACTTCCTCTTGATTGGCCAACTCGGAAACGGAT
TGCTTTGGGGTCCGCTAGGGGTCTTTCGTATTTGCATGATCATTGTGATC
CAAAGATCATTCACCGTGATGTGAAAGCGGCTAACATTTTGTTGGATGAG
GAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCTAAACTTATGGACTA
CAAGGATACCCATGTCACTACGGCAGTCCGTGGCACCATTGGGCATATAG
CTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGAAAACTGATGTCTTT
GGTTATGGGATTATGCTTCTAGAGCTAATCACTGGACAGAGAGCCTTTGA
TCTTGCTCGTCTGGCAAATGATGATGATGTCATGC
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