CX287059

Overview
NameCX287059
Unique NameCX287059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length315
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig498 contig Ccv1_Contig498:237..551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.084e-13
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 2
Query:    8 DNVLQSWDPTLVNPCTWFHITCN-QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            D+ +  W P   +PC W  +TC+ +  RV  L+L    + G L P++GKL+HL+ L L+ N + G IP  LGN  +L  + L +N  +G IP  +  L  L
Sbjct:   48 DSFIHQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGL 148          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.919e-13
Identity = 46/110 (41.82%), Postives = 58/110 (52.73%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNPCT--WFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLV 310
            DP N LQ W  T  +PC   W  + C  D       V  L L N NL+G+L PELG L +L  L    N++ G IP ELGNL  LI L L  N ++G +P  L  L +L+
Sbjct:   45 DPLNHLQDWKKT--DPCASNWTGVICIPDPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLL 152          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.919e-13
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 2
Query:   11 NVLQSWDPTLVNP-CTWFHITC-NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            N+L  WD    +  C+W  + C N    V  L+L + NL G + P +G L +LQ ++L  N + G IP E+GN  SL+ LDL  N + G IP S++KLK L
Sbjct:   45 NMLLDWDDVHNSDLCSWRGVFCDNVSYSVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLAGQIPDEIGNCASLVYLDLSENLLYGDIPFSISKLKQL 145          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.304e-12
Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNPCTWFHITCNQDNR--------VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            D  N L +W+     PC W  + C+            VT LDL + NLSG + P +G L +L YL L  N + G IP E+GN   L  + L NN   G IP  + KL  L
Sbjct:   50 DSLNRLHNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQL 159          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.304e-12
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNP-CTWFHITC-NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            D +NVL  W  +  +  C W  ++C N    V  L+L + NL G + P +G L+ L  ++L  N + G IP E+G+  SL +LDL  N +SG IP S++KLK L
Sbjct:   39 DVNNVLYDWTTSPSSDYCVWRGVSCENVTFNVVALNLSDLNLDGEISPAIGDLKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQL 142          

HSP 2 Score: 68.9366 bits (167), Expect = 8.755e-12
Identity = 30/71 (42.25%), Postives = 50/71 (70.42%), Query Frame = 2
Query:   98 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLV 310
            LDL N+ ++G +   LG LEHL  + L +N+I G +P + GNL+S++ +DL NN++SG IP  L +L++++
Sbjct:  432 LDLSNNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQNII 502          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.009e-12
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   29 DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            DP L     W  + C+  N     R+  LDL +  L+G++VP++  L  LQ L+L  N + G +P  L N+KSL+ ++L NNN+ G IP +L   K+L
Sbjct:  391 DPCLPQQFLWTGLNCSYMNMSTSPRIISLDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNL 488          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.009e-12
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNPCTWFHITCN-QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            DP + L+SW      PC+W ++ CN + +RV  L L    L+G++   + KL+ L+ L L  NN  G I   L N   L  LDL +NN+SG+IP SL  + SL
Sbjct:   49 DPFSHLESWTEDDNTPCSWSYVKCNPKTSRVIELSLDGLALTGKINRGIQKLQRLKVLSLSNNNFTGNINA-LSNNNHLQKLDLSHNNLSGQIPSSLGSITSL 150          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.009e-12
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 2
Query:    5 PDNVLQSWDPTLVNPCTWFHITCNQ-DNRVT-------------------------RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            P +V   W+P+  +PC W +ITC+  DN++                          +L + N+NL+G +  E+G    L  ++L  N++ G IP  LG LK+L  L L +N ++GKIPP L    SL
Sbjct:   54 PPSVFSGWNPSDSDPCQWPYITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSL 180          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.009e-12
Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNP---CTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            DP  VL  W  T++     C W  ITC+    V  + L    L G L P +  L +LQ L+L  N+  G IP E+G L  L  L LY N  SG IP  + +LK++ +
Sbjct:   44 DPLGVLSDW--TIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFY 148          

HSP 2 Score: 66.6254 bits (161), Expect = 4.345e-11
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 2
Query:   89 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            +T LDL  + L+G++  + G L +LQ L L +N ++G IP E+GN  SL+ L+LY+N ++GKIP  L  L  L
Sbjct:  218 LTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQL 290          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.930e-12
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 2
Query:   23 SW--DPTLVNPCTWFHITCNQDNR-----VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            SW  DP +     W  + C   +      +T LDL +S L+G +   +  L HLQ L+L  NN+ G +P  L ++KSL+ ++L  NN+SG +PPSL + K +
Sbjct:  375 SWQGDPCVPKQLLWDGLNCKNSDISTPPIITSLDLSSSGLTGIITQAIKNLTHLQILDLSDNNLTGEVPEFLADIKSLLVINLSGNNLSGSVPPSLLQKKGM 476          
The following BLAST results are available for this feature:
BLAST of CX287059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
FEI1_ARATH2.084e-1336.63LRR receptor-like serine/threonine-protein kinase ... [more]
Y5374_ARATH7.919e-1341.82Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH7.919e-1340.59LRR receptor-like serine/threonine-protein kinase ... [more]
Y2317_ARATH2.304e-1237.27Probable leucine-rich repeat receptor-like protein... [more]
ERECT_ARATH2.304e-1239.42LRR receptor-like serine/threonine-protein kinase ... [more]
Y5169_ARATH3.009e-1237.76Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH3.009e-1239.81Probably inactive leucine-rich repeat receptor-lik... [more]
RCH1_ARATH3.009e-1232.28LRR receptor-like serine/threonine-protein kinase ... [more]
FLS2_ARATH3.009e-1237.38LRR receptor-like serine/threonine-protein kinase ... [more]
Y5182_ARATH3.930e-1236.27Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01004B12SK Veg1 Citrus clementina cDNA clone C01004B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287059 ID=CX287059; Name=CX287059; organism=Citrus clementina; type=EST; length=315bp
AGATCCCGATAACGTGCTTCAGAGCTGGGATCCAACTCTCGTCAATCCCT
GCACTTGGTTTCACATAACCTGTAATCAGGACAACCGCGTTACCCGACTG
GATTTGGGTAATTCAAATCTATCCGGCCGTCTCGTCCCTGAACTGGGCAA
GCTCGAGCATTTGCAATACCTGGAACTTTACAAAAACAACATCCAAGGAA
CTATCCCTGTCGAGCTCGGTAACTTGAAGAGCCTCATCAGCTTGGACTTG
TATAATAACAACGTCTCGGGGAAAATCCCTCCTTCCTTGGCTAAATTGAA
ATCTCTTGTTTTTTT
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