CX287059

Overview
NameCX287059
Unique NameCX287059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length315
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig498 contig Ccv1_Contig498:237..551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.133e-12
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 2
Query:   98 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            L+L N+ L+G +   LG L++L  L LY+N + G IP ELGN++S+I L L NN ++G IP S   LK+L +
Sbjct:  323 LELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTY 394          

HSP 2 Score: 66.2402 bits (160), Expect = 5.675e-11
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   89 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            +T L L  + L+G +   LG L++L  L L++N + G IP +LGN++S+I L+L NN ++G IP SL  LK+L
Sbjct:  272 MTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNL 344          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.703e-12
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 2
Query:    5 PDNVLQSW--DPTLVNPCT--WFHITCN-QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            P  V  +W  + +   PC   WF + C+   N V  L+L  S LSG+L  E+G+L+ L  L+L  N+  G +P  LGN  SL  LDL NN+ SG++P     L++L F
Sbjct:   45 PLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTF 152          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.755e-12
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 2
Query:   83 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            +R+  L L ++ L+G +  ELGK+++L+++ L  NN+ G IP ++G L SL  LDL  NN+SG IPPSL  LK L +
Sbjct:  193 SRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYNNLSGEIPYQIGGLSSLNHLDLVYNNLSGPIPPSLGDLKKLEY 269          

HSP 2 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 2
Query:   89 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            +  LDL  +NLSG + P LG L+ L+Y+ LY+N + G IP  + +L++LISLD  +N++SG+IP  +A+++SL
Sbjct:  243 LNHLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDNSLSGEIPELVAQMQSL 315          

HSP 3 Score: 66.2402 bits (160), Expect = 5.675e-11
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 2
Query:  104 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLV 310
            LG +NLSG +  ++G L  L +L+L  NN+ G IP  LG+LK L  + LY N +SG+IPPS+  L++L+
Sbjct:  224 LGYNNLSGEIPYQIGGLSSLNHLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLI 292          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query:   14 VLQSWDPTLVNPCTWFHITCNQDN-RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLV 310
            VL SW+ +    C W  +TC + N RVT L+LG   L G + P +G L  L  L+LY+N   GTIP E+G L  L  LD+  N + G IP  L     L+
Sbjct:   43 VLSSWNHSFPL-CNWKGVTCGRKNKRVTHLELGRLQLGGVISPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRLL 141          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 2
Query:   44 NPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNN 262
            +PC W HI C    RVTR+ +G+S L G L P+L  L  L+ LEL  NNI G +P  L  L SL  L L NNN
Sbjct:   51 DPCKWTHIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVP-SLSGLASLQVLMLSNNN 122          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 32/70 (45.71%), Postives = 52/70 (74.29%), Query Frame = 2
Query:   98 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            LDL +++LSG +  E+ +L+ L+ L L  NN++G IP+E+GNL  L+ L L++N +SG+IP S+ +LK+L
Sbjct:  122 LDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIGELKNL 191          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:   89 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            ++RLDLG +N SG+L  E+ +++ L++L L  NN  G IP E GN+  L +LDL  N ++G IP S  KL SL++
Sbjct:  375 LSRLDLGYNNFSGQLPTEISQIQSLKFLILAYNNFSGDIPQEYGNMPGLQALDLSFNKLTGSIPASFGKLTSLLW 449          

HSP 2 Score: 66.6254 bits (161), Expect = 4.345e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   74 NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            +Q +R++ L LG +   G+L PE+G+L  L +L L +NN  G IP E+GNLK L +LDL  NN SG  P SL  L  L
Sbjct:  591 SQMDRLSTLHLGFNEFEGKLPPEIGQLP-LAFLNLTRNNFSGEIPQEIGNLKCLQNLDLSFNNFSGNFPTSLNDLNEL 667          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 2
Query:    2 DPDNVLQSWDPTLVNPCTWFHITCNQDN--------RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSL 307
            DP +VL++W+     PC W  +TC +          RVT L L N +L G + P+L  + +L+ L+L  N   G++P  + N   L S+ L +NN+SG +P S+  + +L
Sbjct:   44 DPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNL 153          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 2
Query:   11 NVLQSWDPTLVNP-CTWFHITC-NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSLAKLKSLVF 313
            N+L  WD    +  C+W  + C N    V  L+L N NL G +   LG L +LQ ++L  N + G IP E+GN  SL  +D   N + G IP S++KLK L F
Sbjct:   47 NMLLDWDDVHNHDFCSWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEF 149          
BLAST of CX287059 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.547e-11
Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 2
Query:   23 SW--DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNVSGKIPPSL 289
            SW  DP +     W  +TC   N     R+  LDL +S L+G +VPE+  L  L+ L+   NN+ G +P  L  +KSL+ ++L  NN+SG +P +L
Sbjct:  385 SWQGDPCVPQQLLWDGLTCEYTNMSTPPRIHSLDLSSSELTGIIVPEIQNLTELKKLDFSNNNLTGGVPEFLAKMKSLLVINLSGNNLSGSVPQAL 480          
The following BLAST results are available for this feature:
BLAST of CX287059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
Y1571_ARATH5.133e-1245.83Probable leucine-rich repeat receptor-like protein... [more]
PEPR2_ARATH6.703e-1238.89Leucine-rich repeat receptor-like protein kinase P... [more]
Y2579_ARATH8.755e-1245.45Probably inactive leucine-rich repeat receptor-lik... [more]
Y3475_ARATH1.143e-1141.00Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH1.143e-1149.32Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y4265_ARATH1.950e-1145.71Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH1.950e-1145.33Probable LRR receptor-like serine/threonine-protei... [more]
RPKL_ARATH1.950e-1133.64Receptor protein kinase-like protein At4g34220 OS=... [more]
ERL2_ARATH1.950e-1139.81LRR receptor-like serine/threonine-protein kinase ... [more]
Y1756_ARATH2.547e-1137.50Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC01004B12SK Veg1 Citrus clementina cDNA clone C01004B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287059 ID=CX287059; Name=CX287059; organism=Citrus clementina; type=EST; length=315bp
AGATCCCGATAACGTGCTTCAGAGCTGGGATCCAACTCTCGTCAATCCCT
GCACTTGGTTTCACATAACCTGTAATCAGGACAACCGCGTTACCCGACTG
GATTTGGGTAATTCAAATCTATCCGGCCGTCTCGTCCCTGAACTGGGCAA
GCTCGAGCATTTGCAATACCTGGAACTTTACAAAAACAACATCCAAGGAA
CTATCCCTGTCGAGCTCGGTAACTTGAAGAGCCTCATCAGCTTGGACTTG
TATAATAACAACGTCTCGGGGAAAATCCCTCCTTCCTTGGCTAAATTGAA
ATCTCTTGTTTTTTT
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