CX287060

Overview
NameCX287060
Unique NameCX287060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length291
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_SCHJA (60S ribosomal protein L24 OS=Schistosoma japonicum GN=RPL24 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.362e-12
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 1 
Query:    4 FLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291
            F F N K +R  + +  P +++WT +YR+++KK ++ E  K +     K  +R I GA+L  I  +R +KPEVR A R+ A+R  KE+ K+ + EK
Sbjct:   29 FYFINKKSERSHYLKRNPREISWTVLYRRKYKKGMSEEQTKNELSVLTKT-ARGIAGASLAEIMAKRNQKPEVRKAMRDQAIRAAKEKQKQKELEK 123
The following BLAST results are available for this feature:
BLAST of CX287060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL24_SCHJA2.362e-1237.5060S ribosomal protein L24 OS=Schistosoma japonicum... [more]

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Properties
Property NameValue
Genbank descriptionC01004C01SK Veg1 Citrus clementina cDNA clone C01004C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287060 ID=CX287060; Name=CX287060; organism=Citrus clementina; type=EST; length=291bp
GTTTTCCTCTTTGCCAATTCTAAATGCAAGAGGTACTTCCACAACCGATT
GAAGCCATCGAAGCTTACATGGACAGCCATGTACAGGAAACAGCACAAGA
AGGACATTGCTGCTGAGGCAGTTAAGAAGAAGCGTCGTGCCACTAAGAAG
CCCTATTCAAGATCTATAGTTGGTGCCACCTTGGAAGTTATCCAGAAGAG
AAGAACTGAGAAGCCAGAAGTCCGAGATGCTGCACGGGAGGCTGCACTTC
GTGAAATTAAGGAGAGGATCAAGAAGACTAAGGATGAAAAG
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