CX287061
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.492e-22 Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 2 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH+RWA+LGA Sbjct: 46 KWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGA 99
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.237e-21 Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 2 Query: 14 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGA Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGA 50
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.137e-21 Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 2 Query: 2 KYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH+RWA+LGA Sbjct: 40 KFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGA 94
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.137e-21 Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 2 Query: 2 KYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAMLGA Sbjct: 43 KWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGA 97
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.016e-21 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 2 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM A Sbjct: 60 KYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAA 113
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.978e-20 Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 5 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 154 YLGP S PSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIH RWA+ Sbjct: 56 YLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAI 105
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.764e-16 Identity = 42/54 (77.78%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 2 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 KYLGPFS + PSYLTGEF G LSADPETFAKNRELEVIHSRWAMLGA Sbjct: 55 KYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGA 100
BLAST of CX287061 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.239e-13 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 26 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 163 Q P TGEFPGDYGWDTAGLSADPETF + RELE+IH+R +LGA Sbjct: 71 QHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGA 116 The following BLAST results are available for this feature:
BLAST of CX287061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287061 ID=CX287061; Name=CX287061; organism=Citrus clementina; type=EST; length=165bpback to top |