CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATW (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLSGDVKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRAT1 (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTH (Chaperone protein dnaK OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            D+ +T   +D++LLVGG TR+P VQE V + FGK P KG+NPDE VA+GAAIQ G+L G+VK+LLLLDVTPLSLGIETLGG+FT+LI RNTTI TKKSQ+FSTAAD
Sbjct:  297 DSGLTPDKIDKILLVGGSTRIPAVQEAVRKFFGKEPFKGINPDECVAIGAAIQAGVLTGEVKDLLLLDVTPLSLGIETLGGVFTKLIERNTTIPTKKSQIFSTAAD 402
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLFF (Chaperone protein dnaK OS=Chlamydophila felis (strain Fe/C-56) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 74/106 (69.81%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQE+V +IFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQEIVKDIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_AMOA5 (Chaperone protein dnaK OS=Amoebophilus asiaticus (strain 5a2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.423e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+PK+QE V + F K PSKGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLS GIETLGG++T+LI  NTTI TKKS+VFSTAAD
Sbjct:  322 DAGLTVADIDEVILVGGSTRIPKIQEEVEKFFNKKPSKGVNPDEVVAVGAAIQGGVLTGEVKDVLLLDVIPLSFGIETLGGVYTKLIEANTTIPTKKSEVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: HSP7F_CAEEL (Heat shock 70 kDa protein F, mitochondrial OS=Caenorhabditis elegans GN=hsp-6 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA + +  + +VLLVGGM+R+PKVQ  V EIFGK PSK VNPDEAVA+GAAIQG +L GDV ++LLLDVTPLSLGIETLGGI T+LI RNTTI TKKSQVFSTAAD
Sbjct:  351 DAEVKSSQIADVLLVGGMSRMPKVQATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLAGDVTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAAD 456
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GRABC (Chaperone protein dnaK OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 74/106 (69.81%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++ +V+LVGGMTR+PKV E V + FGK P++ VNPDE VA+GAA+QG +L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQVFSTA D
Sbjct:  321 DAGVSAGEISDVILVGGMTRMPKVIEAVKQFFGKEPARNVNPDEVVAIGAAVQGAVLKGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATU (Chaperone protein dnaK OS=Francisella tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATO (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_FRATW1.423e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATT1.423e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRAT11.423e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_CLOTH1.423e-3870.75Chaperone protein dnaK OS=Clostridium thermocellum... [more]
DNAK_CHLFF1.423e-3869.81Chaperone protein dnaK OS=Chlamydophila felis (str... [more]
DNAK_AMOA51.423e-3870.75Chaperone protein dnaK OS=Amoebophilus asiaticus (... [more]
HSP7F_CAEEL1.858e-3874.53Heat shock 70 kDa protein F, mitochondrial OS=Caen... [more]
DNAK_GRABC1.858e-3869.81Chaperone protein dnaK OS=Granulibacter bethesdens... [more]
DNAK_FRATU1.858e-3873.58Chaperone protein dnaK OS=Francisella tularensis G... [more]
DNAK_FRATO1.858e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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