CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATN (Chaperone protein dnaK OS=Francisella tularensis subsp. novicida (strain U112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATH (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATF (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRAP2 (Chaperone protein dnaK OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FLAJ1 (Chaperone protein dnaK OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++T D+DEV+LVGG TR+P++ + V + FGK  SKGVNPDE VA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI  NTTI TKKSQVFSTAAD
Sbjct:  320 DAGLSTSDIDEVILVGGSTRMPRIADEVEKFFGKKASKGVNPDEVVAIGAAIQGGVLSGDVKDVLLLDVTPLSLGIETMGGVLTKLIESNTTIPTKKSQVFSTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_EHRCJ (Chaperone protein dnaK OS=Ehrlichia canis (strain Jake) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 79/106 (74.53%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+   +DEV+LVGGMTRVPKV + V E FG+ P KGVNPDE VA+GAAIQG IL GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  316 DAGISADKIDEVVLVGGMTRVPKVIQKVKEFFGREPHKGVNPDEVVAIGAAIQGSILAGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 421
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCV (Chaperone protein dnaK OS=Chlamydophila caviae GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.858e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQEVV  IFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQEVVKSIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+LVGGMTR+P VQ+ V +IFGK P++ VNPDE VA+GAAIQGG+LRGDVK++LLLDVTPLSLGIETLGG+ TRLI +N TI  +KSQ+FSTAAD
Sbjct:  321 DAGLSPNDIDEVILVGGMTRMPIVQKKVQDIFGKVPNRSVNPDEVVAIGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVMTRLIEKNATIPCRKSQIFSTAAD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQ VV EIFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQAVVKEIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQ VV EIFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQAVVKEIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_FRATN1.858e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATH1.858e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATF1.858e-3873.58Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRAP21.858e-3873.58Chaperone protein dnaK OS=Francisella philomiragia... [more]
DNAK_FLAJ11.858e-3870.75Chaperone protein dnaK OS=Flavobacterium johnsonia... [more]
DNAK_EHRCJ1.858e-3874.53Chaperone protein dnaK OS=Ehrlichia canis (strain ... [more]
DNAK_CHLCV1.858e-3870.75Chaperone protein dnaK OS=Chlamydophila caviae GN=... [more]
DNAK_GEOUR2.427e-3870.75Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_CHLTR2.427e-3870.75Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB2.427e-3870.75Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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