CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQ VV EIFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQAVVKEIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQ VV EIFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQAVVKEIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+VLLVGGM+R+P VQ VV EIFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLSASDIDDVLLVGGMSRMPAVQAVVKEIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLAB (Chaperone protein dnaK OS=Chlamydophila abortus GN=dnaK PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.427e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+D+VLLVGGM+R+P VQEVV  IFGK P+KGVNPDE VA+GAAIQGG+L G+VK++LLLDV PLSLGIETLGG+ T L+ RNTTI T+K Q+FSTAAD
Sbjct:  324 DAKLAASDIDDVLLVGGMSRMPAVQEVVKSIFGKEPNKGVNPDEVVAIGAAIQGGVLGGEVKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAAD 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA     D+ EV+LVGGMTR+PKVQE V + FG+ P KGVNPDE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTI +KKSQVFSTA D
Sbjct:  320 DAGFKPNDIQEVVLVGGMTRMPKVQEAVKKFFGREPHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_PARD8 (Chaperone protein dnaK OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 73/106 (68.87%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++T D+DEV+LVGG TR+P VQ +V + FGK+PSKGVNPDE VA+GAAIQGG+L G+VK++LLLDVTPLSLGIET+GG+ T+LI  NTTI TKKS+ F+TA D
Sbjct:  320 DAGLSTSDIDEVILVGGSTRIPAVQAIVEKFFGKAPSKGVNPDEVVAVGAAIQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTKLIESNTTIPTKKSETFTTAVD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METFK (Chaperone protein dnaK OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+ +V+LVGG TR+PKVQE V E FGK P K VNPDEAVA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+ T+LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGVKVSDIQDVILVGGQTRMPKVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVMTKLIQKNTTIPTKASQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FLAPJ (Chaperone protein dnaK OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T KD+DEV+LVGG TR+P++ + V + FGK  SKGVNPDE VA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI  NTTI TKKSQ+FSTAAD
Sbjct:  320 DAGLTVKDIDEVILVGGSTRMPRIADEVEKFFGKKASKGVNPDEVVAIGAAIQGGVLSGDVKDVLLLDVTPLSLGIETMGGVMTILIESNTTIPTKKSQIFSTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+DEV+LVGGM+R+PKVQ+ V + FG+ P KGVNPDE VALGAA+Q G+L+GDVK++LLLDVTPL+LGIETLGG+FT LI RNTTI TK+SQ FSTA D
Sbjct:  321 DAGLKKSDIDEVILVGGMSRMPKVQQAVQDFFGREPHKGVNPDEVVALGAAVQAGVLQGDVKDVLLLDVTPLTLGIETLGGVFTPLIERNTTIPTKRSQTFSTADD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CAUCR (Chaperone protein dnaK OS=Caulobacter crescentus GN=dnaK PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 3.170e-38
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+DEV+LVGGM+R+PKVQ+ V + FG+ P KGVNPDE VALGAA+Q G+L+GDVK++LLLDVTPL+LGIETLGG+FT LI RNTTI TK+SQ FSTA D
Sbjct:  321 DAGLKKSDIDEVILVGGMSRMPKVQQAVQDFFGREPHKGVNPDEVVALGAAVQAGVLQGDVKDVLLLDVTPLTLGIETLGGVFTPLIERNTTIPTKRSQTFSTADD 426
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLTA2.427e-3870.75Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT22.427e-3870.75Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLMU2.427e-3870.75Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]
DNAK_CHLAB2.427e-3870.75Chaperone protein dnaK OS=Chlamydophila abortus GN... [more]
DNAK_RICPR3.170e-3872.64Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_PARD83.170e-3868.87Chaperone protein dnaK OS=Parabacteroides distason... [more]
DNAK_METFK3.170e-3871.70Chaperone protein dnaK OS=Methylobacillus flagella... [more]
DNAK_FLAPJ3.170e-3870.75Chaperone protein dnaK OS=Flavobacterium psychroph... [more]
DNAK_CAUSK3.170e-3869.81Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]
DNAK_CAUCR3.170e-3869.81Chaperone protein dnaK OS=Caulobacter crescentus G... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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